Protein–RNA interactions for Protein: P16403

HIST1H1C, Histone H1.2, humanhuman

Known RBP Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1CP16403 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HIST1H1CP16403 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.19■□□□□ 0.82
HIST1H1CP16403 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HIST1H1CP16403 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HIST1H1CP16403 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HIST1H1CP16403 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HIST1H1CP16403 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HIST1H1CP16403 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HIST1H1CP16403 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.18■□□□□ 0.82
HIST1H1CP16403 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.18■□□□□ 0.82
HIST1H1CP16403 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
HIST1H1CP16403 EP400NL-214ENST00000641289 2402 ntBASIC20.17■□□□□ 0.82
HIST1H1CP16403 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.17■□□□□ 0.82
HIST1H1CP16403 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HIST1H1CP16403 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HIST1H1CP16403 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.17■□□□□ 0.82
HIST1H1CP16403 AL033527.3-201ENST00000566366 1196 ntBASIC20.17■□□□□ 0.82
HIST1H1CP16403 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIST1H1CP16403 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIST1H1CP16403 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIST1H1CP16403 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIST1H1CP16403 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIST1H1CP16403 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.17■□□□□ 0.82
HIST1H1CP16403 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
HIST1H1CP16403 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIST1H1CP16403 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HIST1H1CP16403 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HIST1H1CP16403 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
HIST1H1CP16403 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.16■□□□□ 0.82
HIST1H1CP16403 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.16■□□□□ 0.82
HIST1H1CP16403 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
HIST1H1CP16403 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
HIST1H1CP16403 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HIST1H1CP16403 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HIST1H1CP16403 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.16■□□□□ 0.82
HIST1H1CP16403 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIST1H1CP16403 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
HIST1H1CP16403 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
HIST1H1CP16403 AC103834.1-201ENST00000520383 144 ntBASIC20.15■□□□□ 0.82
HIST1H1CP16403 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.15■□□□□ 0.82
HIST1H1CP16403 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIST1H1CP16403 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HIST1H1CP16403 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIST1H1CP16403 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.15■□□□□ 0.82
HIST1H1CP16403 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIST1H1CP16403 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
HIST1H1CP16403 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
HIST1H1CP16403 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
HIST1H1CP16403 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
HIST1H1CP16403 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.14■□□□□ 0.81
HIST1H1CP16403 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
HIST1H1CP16403 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.14■□□□□ 0.81
HIST1H1CP16403 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.14■□□□□ 0.81
HIST1H1CP16403 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.14■□□□□ 0.81
HIST1H1CP16403 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HIST1H1CP16403 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HIST1H1CP16403 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
HIST1H1CP16403 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
HIST1H1CP16403 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
HIST1H1CP16403 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HIST1H1CP16403 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HIST1H1CP16403 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
HIST1H1CP16403 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
HIST1H1CP16403 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
HIST1H1CP16403 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.13■□□□□ 0.81
HIST1H1CP16403 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
HIST1H1CP16403 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.13■□□□□ 0.81
HIST1H1CP16403 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HIST1H1CP16403 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HIST1H1CP16403 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HIST1H1CP16403 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
HIST1H1CP16403 KRT8P33-201ENST00000508125 1423 ntBASIC20.12■□□□□ 0.81
HIST1H1CP16403 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.12■□□□□ 0.81
HIST1H1CP16403 GUSBP5-202ENST00000510805 1989 ntBASIC20.12■□□□□ 0.81
HIST1H1CP16403 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
HIST1H1CP16403 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.12■□□□□ 0.81
HIST1H1CP16403 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
HIST1H1CP16403 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HIST1H1CP16403 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HIST1H1CP16403 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.12■□□□□ 0.81
HIST1H1CP16403 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.12■□□□□ 0.81
HIST1H1CP16403 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HIST1H1CP16403 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
HIST1H1CP16403 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HIST1H1CP16403 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
HIST1H1CP16403 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.12■□□□□ 0.81
HIST1H1CP16403 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HIST1H1CP16403 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
HIST1H1CP16403 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HIST1H1CP16403 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HIST1H1CP16403 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HIST1H1CP16403 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.1■□□□□ 0.81
HIST1H1CP16403 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HIST1H1CP16403 AC103724.3-201ENST00000564481 992 ntBASIC20.1■□□□□ 0.81
HIST1H1CP16403 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.1■□□□□ 0.81
HIST1H1CP16403 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.1■□□□□ 0.81
HIST1H1CP16403 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HIST1H1CP16403 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.1■□□□□ 0.81
HIST1H1CP16403 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HIST1H1CP16403 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms