Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
UBL4AP11441 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.73■□□□□ 0.91
UBL4AP11441 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UBL4AP11441 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UBL4AP11441 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UBL4AP11441 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
UBL4AP11441 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
UBL4AP11441 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
UBL4AP11441 ANOS2P-203ENST00000472227 1816 ntBASIC20.72■□□□□ 0.91
UBL4AP11441 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.72■□□□□ 0.91
UBL4AP11441 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
UBL4AP11441 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
UBL4AP11441 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.72■□□□□ 0.91
UBL4AP11441 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.72■□□□□ 0.91
UBL4AP11441 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
UBL4AP11441 AC010997.5-201ENST00000609182 354 ntBASIC20.72■□□□□ 0.91
UBL4AP11441 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
UBL4AP11441 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
UBL4AP11441 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
UBL4AP11441 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
UBL4AP11441 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
UBL4AP11441 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBL4AP11441 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBL4AP11441 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBL4AP11441 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.71■□□□□ 0.91
UBL4AP11441 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
UBL4AP11441 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.71■□□□□ 0.91
UBL4AP11441 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.71■□□□□ 0.91
UBL4AP11441 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.71■□□□□ 0.91
UBL4AP11441 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.71■□□□□ 0.91
UBL4AP11441 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
UBL4AP11441 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.7■□□□□ 0.9
UBL4AP11441 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
UBL4AP11441 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
UBL4AP11441 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBL4AP11441 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBL4AP11441 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBL4AP11441 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBL4AP11441 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBL4AP11441 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBL4AP11441 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBL4AP11441 DUSP8P5-201ENST00000422884 1815 ntBASIC20.69■□□□□ 0.9
UBL4AP11441 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBL4AP11441 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBL4AP11441 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBL4AP11441 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
UBL4AP11441 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.69■□□□□ 0.9
UBL4AP11441 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
UBL4AP11441 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.69■□□□□ 0.9
UBL4AP11441 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.69■□□□□ 0.9
UBL4AP11441 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
UBL4AP11441 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBL4AP11441 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBL4AP11441 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBL4AP11441 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.68■□□□□ 0.9
UBL4AP11441 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.68■□□□□ 0.9
UBL4AP11441 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBL4AP11441 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBL4AP11441 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBL4AP11441 UNC93B8-201ENST00000511903 705 ntBASIC20.68■□□□□ 0.9
UBL4AP11441 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
UBL4AP11441 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBL4AP11441 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
UBL4AP11441 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.68■□□□□ 0.9
UBL4AP11441 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.68■□□□□ 0.9
UBL4AP11441 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.68■□□□□ 0.9
UBL4AP11441 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.68■□□□□ 0.9
UBL4AP11441 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBL4AP11441 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBL4AP11441 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UBL4AP11441 AC092068.2-201ENST00000590491 1708 ntBASIC20.67■□□□□ 0.9
UBL4AP11441 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UBL4AP11441 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBL4AP11441 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBL4AP11441 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.67■□□□□ 0.9
UBL4AP11441 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.67■□□□□ 0.9
UBL4AP11441 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBL4AP11441 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
UBL4AP11441 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBL4AP11441 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UBL4AP11441 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.67■□□□□ 0.9
UBL4AP11441 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBL4AP11441 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBL4AP11441 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
UBL4AP11441 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBL4AP11441 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
UBL4AP11441 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBL4AP11441 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBL4AP11441 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.66■□□□□ 0.9
UBL4AP11441 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBL4AP11441 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
UBL4AP11441 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.66■□□□□ 0.9
UBL4AP11441 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.66■□□□□ 0.9
UBL4AP11441 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBL4AP11441 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
UBL4AP11441 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.66■□□□□ 0.9
UBL4AP11441 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBL4AP11441 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBL4AP11441 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.65■□□□□ 0.9
UBL4AP11441 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms