Protein–RNA interactions for Protein: P0CH08

RPL40A, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40AP0CH08 FLO8YER109C 2400 nt4.03□□□□□ -1.76
RPL40AP0CH08 NMD3YHR170W 1557 nt4.03□□□□□ -1.76
RPL40AP0CH08 HIS6YIL020C 786 nt4.03□□□□□ -1.76
RPL40AP0CH08 PUS5YLR165C 765 nt4.03□□□□□ -1.76
RPL40AP0CH08 MOT2YER068W 1764 nt4.03□□□□□ -1.76
RPL40AP0CH08 MSK1YNL073W 1731 nt4.03□□□□□ -1.76
RPL40AP0CH08 PDR15YDR406W 4590 nt4.03□□□□□ -1.76
RPL40AP0CH08 STR2YJR130C 1920 nt4.03□□□□□ -1.76
RPL40AP0CH08 RAD28YDR030C 1521 nt4.02□□□□□ -1.77
RPL40AP0CH08 RRB1YMR131C 1536 nt4.02□□□□□ -1.77
RPL40AP0CH08 YDR545C-AYDR545C-A 480 nt4.02□□□□□ -1.77
RPL40AP0CH08 YEL077W-AYEL077W-A 483 nt4.02□□□□□ -1.77
RPL40AP0CH08 YER190C-BYER190C-B 483 nt4.02□□□□□ -1.77
RPL40AP0CH08 YFL068WYFL068W 483 nt4.02□□□□□ -1.77
RPL40AP0CH08 YGR296C-BYGR296C-B 483 nt4.02□□□□□ -1.77
RPL40AP0CH08 YHL050W-AYHL050W-A 483 nt4.02□□□□□ -1.77
RPL40AP0CH08 YHR219C-AYHR219C-A 483 nt4.02□□□□□ -1.77
RPL40AP0CH08 YIL177W-AYIL177W-A 483 nt4.02□□□□□ -1.77
RPL40AP0CH08 COA3YJL062W-A 258 nt4.02□□□□□ -1.77
RPL40AP0CH08 YJL225W-AYJL225W-A 483 nt4.02□□□□□ -1.77
RPL40AP0CH08 TVP38YKR088C 1014 nt4.02□□□□□ -1.77
RPL40AP0CH08 YLL066W-AYLL066W-A 483 nt4.02□□□□□ -1.77
RPL40AP0CH08 YLL067W-AYLL067W-A 483 nt4.02□□□□□ -1.77
RPL40AP0CH08 NKP2YLR315W 462 nt4.02□□□□□ -1.77
RPL40AP0CH08 FLD1YLR404W 858 nt4.02□□□□□ -1.77
RPL40AP0CH08 YLR466C-AYLR466C-A 483 nt4.02□□□□□ -1.77
RPL40AP0CH08 YLR467C-AYLR467C-A 483 nt4.02□□□□□ -1.77
RPL40AP0CH08 YML133W-BYML133W-B 483 nt4.02□□□□□ -1.77
RPL40AP0CH08 SEC17YBL050W 879 nt4.02□□□□□ -1.77
RPL40AP0CH08 YNL339W-BYNL339W-B 483 nt4.02□□□□□ -1.77
RPL40AP0CH08 YBL113W-AYBL113W-A 483 nt4.02□□□□□ -1.77
RPL40AP0CH08 YOR396C-AYOR396C-A 483 nt4.02□□□□□ -1.77
RPL40AP0CH08 YPL283W-BYPL283W-B 483 nt4.02□□□□□ -1.77
RPL40AP0CH08 YPR204C-AYPR204C-A 483 nt4.02□□□□□ -1.77
RPL40AP0CH08 BMT2YBR141C 1014 nt4.02□□□□□ -1.77
RPL40AP0CH08 POP4YBR257W 840 nt4.02□□□□□ -1.77
RPL40AP0CH08 GRC3YLL035W 1899 nt4.02□□□□□ -1.77
RPL40AP0CH08 SEC9YGR009C 1956 nt4.02□□□□□ -1.77
RPL40AP0CH08 IMA3YIL172C 1770 nt4.02□□□□□ -1.77
RPL40AP0CH08 IMA4YJL221C 1770 nt4.02□□□□□ -1.77
RPL40AP0CH08 LTV1YKL143W 1392 nt4.02□□□□□ -1.77
RPL40AP0CH08 ESF1YDR365C 1887 nt4.01□□□□□ -1.77
RPL40AP0CH08 YDR246W-AYDR246W-A 201 nt4.01□□□□□ -1.77
RPL40AP0CH08 YGR018CYGR018C 330 nt4.01□□□□□ -1.77
RPL40AP0CH08 YHL034W-AYHL034W-A 462 nt4.01□□□□□ -1.77
RPL40AP0CH08 YIL021C-AYIL021C-A 270 nt4.01□□□□□ -1.77
RPL40AP0CH08 GPI12YMR281W 915 nt4.01□□□□□ -1.77
RPL40AP0CH08 YGR027W-BYGR027W-B 5268 nt4.01□□□□□ -1.77
RPL40AP0CH08 YLR227W-BYLR227W-B 5268 nt4.01□□□□□ -1.77
RPL40AP0CH08 YPR158C-DYPR158C-D 5268 nt4.01□□□□□ -1.77
RPL40AP0CH08 ARN2YHL047C 1863 nt4.01□□□□□ -1.77
RPL40AP0CH08 RBA50YDR527W 1320 nt4□□□□□ -1.77
RPL40AP0CH08 PRP28YDR243C 1767 nt4□□□□□ -1.77
RPL40AP0CH08 PAH1YMR165C 2589 nt4□□□□□ -1.77
RPL40AP0CH08 ARP1YHR129C 1155 nt4□□□□□ -1.77
RPL40AP0CH08 TDA8YAL064C-A 381 nt4□□□□□ -1.77
RPL40AP0CH08 SDO1YLR022C 753 nt4□□□□□ -1.77
RPL40AP0CH08 EGT2YNL327W 3126 nt4□□□□□ -1.77
RPL40AP0CH08 MNN4YKL201C 3537 nt4□□□□□ -1.77
RPL40AP0CH08 AKL1YBR059C 3327 nt4□□□□□ -1.77
RPL40AP0CH08 TFG1YGR186W 2208 nt3.99□□□□□ -1.77
RPL40AP0CH08 SYP1YCR030C 2613 nt3.99□□□□□ -1.77
RPL40AP0CH08 YHR173CYHR173C 339 nt3.99□□□□□ -1.77
RPL40AP0CH08 YSF3YNL138W-A 258 nt3.99□□□□□ -1.77
RPL40AP0CH08 OPY2YPR075C 1083 nt3.99□□□□□ -1.77
RPL40AP0CH08 RCK2YLR248W 1833 nt3.99□□□□□ -1.77
RPL40AP0CH08 SSB2YNL209W 1842 nt3.99□□□□□ -1.77
RPL40AP0CH08 KIC1YHR102W 3243 nt3.99□□□□□ -1.77
RPL40AP0CH08 MET4YNL103W 2019 nt3.99□□□□□ -1.77
RPL40AP0CH08 RTC5YOR118W 1704 nt3.98□□□□□ -1.77
RPL40AP0CH08 SNA2YDR525W-A 240 nt3.98□□□□□ -1.77
RPL40AP0CH08 NAT2YGR147C 867 nt3.98□□□□□ -1.77
RPL40AP0CH08 FUR1YHR128W 651 nt3.98□□□□□ -1.77
RPL40AP0CH08 YIR020W-AYIR020W-A 243 nt3.98□□□□□ -1.77
RPL40AP0CH08 PIR3YKL163W 978 nt3.98□□□□□ -1.77
RPL40AP0CH08 YML031C-AYML031C-A 336 nt3.98□□□□□ -1.77
RPL40AP0CH08 YMR084WYMR084W 789 nt3.98□□□□□ -1.77
RPL40AP0CH08 SNF3YDL194W 2655 nt3.98□□□□□ -1.77
RPL40AP0CH08 ATG7YHR171W 1893 nt3.97□□□□□ -1.77
RPL40AP0CH08 RIM21YNL294C 1602 nt3.97□□□□□ -1.77
RPL40AP0CH08 YHR032C-AYHR032C-A 120 nt3.97□□□□□ -1.77
RPL40AP0CH08 IGO2YHR132W-A 396 nt3.97□□□□□ -1.77
RPL40AP0CH08 VPS68YOL129W 555 nt3.97□□□□□ -1.77
RPL40AP0CH08 TUL1YKL034W 2277 nt3.97□□□□□ -1.77
RPL40AP0CH08 SPC105YGL093W 2754 nt3.97□□□□□ -1.77
RPL40AP0CH08 KIN3YAR018C 1308 nt3.96□□□□□ -1.77
RPL40AP0CH08 KGD1YIL125W 3045 nt3.96□□□□□ -1.78
RPL40AP0CH08 YJL218WYJL218W 591 nt3.96□□□□□ -1.78
RPL40AP0CH08 CDC42YLR229C 576 nt3.96□□□□□ -1.78
RPL40AP0CH08 IMP1YMR150C 573 nt3.96□□□□□ -1.78
RPL40AP0CH08 GRE1YPL223C 507 nt3.96□□□□□ -1.78
RPL40AP0CH08 VAC7YNL054W 3498 nt3.96□□□□□ -1.78
RPL40AP0CH08 MET7YOR241W 1647 nt3.95□□□□□ -1.78
RPL40AP0CH08 XKS1YGR194C 1803 nt3.95□□□□□ -1.78
RPL40AP0CH08 PEP5YMR231W 3090 nt3.95□□□□□ -1.78
RPL40AP0CH08 ARO80YDR421W 2853 nt3.95□□□□□ -1.78
RPL40AP0CH08 ARG82YDR173C 1068 nt3.95□□□□□ -1.78
RPL40AP0CH08 YGR017WYGR017W 894 nt3.95□□□□□ -1.78
RPL40AP0CH08 DSS4YPR017C 432 nt3.95□□□□□ -1.78
RPL40AP0CH08 OPY1YBR129C 987 nt3.95□□□□□ -1.78
Retrieved 100 of 7,029 protein–RNA pairs in 11.2 ms