Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RETP07949 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC22.71■■□□□ 1.23
RETP07949 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC22.71■■□□□ 1.23
RETP07949 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC22.71■■□□□ 1.23
RETP07949 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC22.71■■□□□ 1.23
RETP07949 AC126544.1-201ENST00000580842 1059 ntBASIC22.71■■□□□ 1.23
RETP07949 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC22.71■■□□□ 1.23
RETP07949 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC22.71■■□□□ 1.23
RETP07949 AL358852.1-201ENST00000623174 1268 ntBASIC22.71■■□□□ 1.23
RETP07949 C17orf82-201ENST00000623772 1530 ntBASIC22.71■■□□□ 1.23
RETP07949 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22.71■■□□□ 1.23
RETP07949 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RETP07949 AC138932.3-201ENST00000567634 1902 ntBASIC22.7■■□□□ 1.23
RETP07949 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
RETP07949 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
RETP07949 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC22.7■■□□□ 1.22
RETP07949 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC22.7■■□□□ 1.22
RETP07949 AC027612.3-201ENST00000413684 1047 ntBASIC22.7■■□□□ 1.22
RETP07949 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC22.7■■□□□ 1.22
RETP07949 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
RETP07949 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
RETP07949 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RETP07949 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22.7■■□□□ 1.22
RETP07949 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RETP07949 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
RETP07949 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RETP07949 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22.69■■□□□ 1.22
RETP07949 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.69■■□□□ 1.22
RETP07949 AL139125.2-201ENST00000623134 1869 ntBASIC22.69■■□□□ 1.22
RETP07949 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.69■■□□□ 1.22
RETP07949 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC22.69■■□□□ 1.22
RETP07949 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC22.69■■□□□ 1.22
RETP07949 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC22.69■■□□□ 1.22
RETP07949 MIR3181-201ENST00000578512 73 ntBASIC22.69■■□□□ 1.22
RETP07949 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC22.69■■□□□ 1.22
RETP07949 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
RETP07949 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RETP07949 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RETP07949 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RETP07949 HLA-L-209ENST00000420110 1011 ntBASIC22.68■■□□□ 1.22
RETP07949 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC22.68■■□□□ 1.22
RETP07949 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RETP07949 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22.68■■□□□ 1.22
RETP07949 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
RETP07949 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC22.67■■□□□ 1.22
RETP07949 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RETP07949 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
RETP07949 TSPY26P-201ENST00000476365 1326 ntBASIC22.67■■□□□ 1.22
RETP07949 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
RETP07949 AC006455.2-201ENST00000429931 906 ntBASIC22.67■■□□□ 1.22
RETP07949 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
RETP07949 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC22.67■■□□□ 1.22
RETP07949 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC22.67■■□□□ 1.22
RETP07949 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RETP07949 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RETP07949 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
RETP07949 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.66■■□□□ 1.22
RETP07949 AC009086.3-201ENST00000623486 1008 ntBASIC22.66■■□□□ 1.22
RETP07949 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
RETP07949 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC22.66■■□□□ 1.22
RETP07949 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RETP07949 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
RETP07949 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RETP07949 AC096887.2-201ENST00000623443 1957 ntBASIC22.65■■□□□ 1.22
RETP07949 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RETP07949 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.65■■□□□ 1.22
RETP07949 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RETP07949 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
RETP07949 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RETP07949 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC22.65■■□□□ 1.22
RETP07949 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.65■■□□□ 1.22
RETP07949 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RETP07949 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
RETP07949 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RETP07949 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RETP07949 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
RETP07949 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
RETP07949 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
RETP07949 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.21
RETP07949 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.64■■□□□ 1.21
RETP07949 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RETP07949 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RETP07949 AC097639.1-201ENST00000565519 1891 ntBASIC22.64■■□□□ 1.21
RETP07949 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
RETP07949 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RETP07949 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RETP07949 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RETP07949 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RETP07949 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RETP07949 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
RETP07949 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RETP07949 NTF6G-201ENST00000591094 616 ntBASIC22.63■■□□□ 1.21
RETP07949 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC22.63■■□□□ 1.21
RETP07949 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22.62■■□□□ 1.21
RETP07949 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RETP07949 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
RETP07949 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.62■■□□□ 1.21
RETP07949 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.62■■□□□ 1.21
RETP07949 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.62■■□□□ 1.21
RETP07949 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms