Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.89■■□□□ 1.26
HLA-DQB2P05538 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
HLA-DQB2P05538 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
HLA-DQB2P05538 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.89■■□□□ 1.26
HLA-DQB2P05538 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC22.89■■□□□ 1.26
HLA-DQB2P05538 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.89■■□□□ 1.26
HLA-DQB2P05538 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC22.89■■□□□ 1.25
HLA-DQB2P05538 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC22.89■■□□□ 1.25
HLA-DQB2P05538 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
HLA-DQB2P05538 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
HLA-DQB2P05538 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC22.88■■□□□ 1.25
HLA-DQB2P05538 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
HLA-DQB2P05538 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
HLA-DQB2P05538 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
HLA-DQB2P05538 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
HLA-DQB2P05538 AL117332.1-201ENST00000622628 974 ntBASIC22.88■■□□□ 1.25
HLA-DQB2P05538 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
HLA-DQB2P05538 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
HLA-DQB2P05538 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
HLA-DQB2P05538 AC009102.2-201ENST00000606772 1639 ntBASIC22.87■■□□□ 1.25
HLA-DQB2P05538 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.87■■□□□ 1.25
HLA-DQB2P05538 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.87■■□□□ 1.25
HLA-DQB2P05538 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
HLA-DQB2P05538 AK3-203ENST00000447596 705 ntTSL 2 BASIC22.87■■□□□ 1.25
HLA-DQB2P05538 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22.87■■□□□ 1.25
HLA-DQB2P05538 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.87■■□□□ 1.25
HLA-DQB2P05538 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC22.87■■□□□ 1.25
HLA-DQB2P05538 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
HLA-DQB2P05538 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
HLA-DQB2P05538 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
HLA-DQB2P05538 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
HLA-DQB2P05538 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.86■■□□□ 1.25
HLA-DQB2P05538 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
HLA-DQB2P05538 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
HLA-DQB2P05538 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC22.86■■□□□ 1.25
HLA-DQB2P05538 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
HLA-DQB2P05538 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
HLA-DQB2P05538 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
HLA-DQB2P05538 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.86■■□□□ 1.25
HLA-DQB2P05538 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
HLA-DQB2P05538 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC22.86■■□□□ 1.25
HLA-DQB2P05538 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
HLA-DQB2P05538 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
HLA-DQB2P05538 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.85■■□□□ 1.25
HLA-DQB2P05538 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
HLA-DQB2P05538 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.85■■□□□ 1.25
HLA-DQB2P05538 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
HLA-DQB2P05538 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
HLA-DQB2P05538 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
HLA-DQB2P05538 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
HLA-DQB2P05538 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.84■■□□□ 1.25
HLA-DQB2P05538 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
HLA-DQB2P05538 DUSP8P3-201ENST00000399571 1760 ntBASIC22.84■■□□□ 1.25
HLA-DQB2P05538 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC22.84■■□□□ 1.25
HLA-DQB2P05538 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
HLA-DQB2P05538 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
HLA-DQB2P05538 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
HLA-DQB2P05538 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
HLA-DQB2P05538 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
HLA-DQB2P05538 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
HLA-DQB2P05538 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC22.84■■□□□ 1.25
HLA-DQB2P05538 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
HLA-DQB2P05538 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
HLA-DQB2P05538 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
HLA-DQB2P05538 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
HLA-DQB2P05538 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC22.83■■□□□ 1.25
HLA-DQB2P05538 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
HLA-DQB2P05538 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.24
HLA-DQB2P05538 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
HLA-DQB2P05538 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
HLA-DQB2P05538 MIR3621-201ENST00000580529 85 ntBASIC22.82■■□□□ 1.24
HLA-DQB2P05538 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC22.82■■□□□ 1.24
HLA-DQB2P05538 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
HLA-DQB2P05538 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC22.82■■□□□ 1.24
HLA-DQB2P05538 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
HLA-DQB2P05538 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.82■■□□□ 1.24
HLA-DQB2P05538 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
HLA-DQB2P05538 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
HLA-DQB2P05538 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
HLA-DQB2P05538 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
HLA-DQB2P05538 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.81■■□□□ 1.24
HLA-DQB2P05538 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
HLA-DQB2P05538 AL356740.2-201ENST00000601559 647 ntBASIC22.81■■□□□ 1.24
HLA-DQB2P05538 NKILA-201ENST00000613231 537 ntTSL 4 BASIC22.81■■□□□ 1.24
HLA-DQB2P05538 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
HLA-DQB2P05538 AC144652.1-201ENST00000609974 1624 ntBASIC22.81■■□□□ 1.24
HLA-DQB2P05538 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC22.81■■□□□ 1.24
HLA-DQB2P05538 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.81■■□□□ 1.24
HLA-DQB2P05538 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
HLA-DQB2P05538 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.8■■□□□ 1.24
HLA-DQB2P05538 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
HLA-DQB2P05538 RASSF1-AS1-201ENST00000629828 790 ntBASIC22.8■■□□□ 1.24
HLA-DQB2P05538 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
HLA-DQB2P05538 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.79■■□□□ 1.24
HLA-DQB2P05538 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
HLA-DQB2P05538 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
HLA-DQB2P05538 C17orf82-201ENST00000623772 1530 ntBASIC22.79■■□□□ 1.24
HLA-DQB2P05538 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.79■■□□□ 1.24
HLA-DQB2P05538 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
HLA-DQB2P05538 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms