Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HIST1H2ABP04908 AC137630.3-201ENST00000607245 391 ntBASIC20.43■□□□□ 0.86
HIST1H2ABP04908 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HIST1H2ABP04908 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HIST1H2ABP04908 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
HIST1H2ABP04908 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
HIST1H2ABP04908 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.42■□□□□ 0.86
HIST1H2ABP04908 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.42■□□□□ 0.86
HIST1H2ABP04908 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HIST1H2ABP04908 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HIST1H2ABP04908 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
HIST1H2ABP04908 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.42■□□□□ 0.86
HIST1H2ABP04908 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
HIST1H2ABP04908 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
HIST1H2ABP04908 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.42■□□□□ 0.86
HIST1H2ABP04908 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HIST1H2ABP04908 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.42■□□□□ 0.86
HIST1H2ABP04908 AC092068.2-201ENST00000590491 1708 ntBASIC20.41■□□□□ 0.86
HIST1H2ABP04908 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HIST1H2ABP04908 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
HIST1H2ABP04908 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.41■□□□□ 0.86
HIST1H2ABP04908 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HIST1H2ABP04908 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
HIST1H2ABP04908 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HIST1H2ABP04908 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HIST1H2ABP04908 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.41■□□□□ 0.86
HIST1H2ABP04908 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.4■□□□□ 0.86
HIST1H2ABP04908 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HIST1H2ABP04908 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
HIST1H2ABP04908 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HIST1H2ABP04908 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HIST1H2ABP04908 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.4■□□□□ 0.86
HIST1H2ABP04908 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HIST1H2ABP04908 BX664725.1-201ENST00000438252 379 ntBASIC20.4■□□□□ 0.86
HIST1H2ABP04908 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
HIST1H2ABP04908 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
HIST1H2ABP04908 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HIST1H2ABP04908 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.4■□□□□ 0.86
HIST1H2ABP04908 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.4■□□□□ 0.86
HIST1H2ABP04908 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
HIST1H2ABP04908 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HIST1H2ABP04908 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
HIST1H2ABP04908 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
HIST1H2ABP04908 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HIST1H2ABP04908 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
HIST1H2ABP04908 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HIST1H2ABP04908 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HIST1H2ABP04908 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.39■□□□□ 0.85
HIST1H2ABP04908 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HIST1H2ABP04908 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.39■□□□□ 0.85
HIST1H2ABP04908 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HIST1H2ABP04908 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
HIST1H2ABP04908 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HIST1H2ABP04908 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HIST1H2ABP04908 CLDN5-201ENST00000403084 2357 ntBASIC20.38■□□□□ 0.85
HIST1H2ABP04908 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.38■□□□□ 0.85
HIST1H2ABP04908 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.38■□□□□ 0.85
HIST1H2ABP04908 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.38■□□□□ 0.85
HIST1H2ABP04908 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HIST1H2ABP04908 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.38■□□□□ 0.85
HIST1H2ABP04908 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HIST1H2ABP04908 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.38■□□□□ 0.85
HIST1H2ABP04908 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
HIST1H2ABP04908 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.38■□□□□ 0.85
HIST1H2ABP04908 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HIST1H2ABP04908 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.38■□□□□ 0.85
HIST1H2ABP04908 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HIST1H2ABP04908 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HIST1H2ABP04908 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HIST1H2ABP04908 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HIST1H2ABP04908 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HIST1H2ABP04908 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HIST1H2ABP04908 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HIST1H2ABP04908 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.37■□□□□ 0.85
HIST1H2ABP04908 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.37■□□□□ 0.85
HIST1H2ABP04908 SNX5-217ENST00000606557 1087 ntBASIC20.37■□□□□ 0.85
HIST1H2ABP04908 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HIST1H2ABP04908 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HIST1H2ABP04908 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HIST1H2ABP04908 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HIST1H2ABP04908 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HIST1H2ABP04908 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HIST1H2ABP04908 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HIST1H2ABP04908 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HIST1H2ABP04908 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.36■□□□□ 0.85
HIST1H2ABP04908 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
HIST1H2ABP04908 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIST1H2ABP04908 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIST1H2ABP04908 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.36■□□□□ 0.85
HIST1H2ABP04908 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIST1H2ABP04908 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HIST1H2ABP04908 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.35■□□□□ 0.85
HIST1H2ABP04908 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
HIST1H2ABP04908 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
HIST1H2ABP04908 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HIST1H2ABP04908 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.35■□□□□ 0.85
HIST1H2ABP04908 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.35■□□□□ 0.85
HIST1H2ABP04908 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.35■□□□□ 0.85
HIST1H2ABP04908 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
HIST1H2ABP04908 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms