Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.75■□□□□ 0.75
APOC1P02654 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
APOC1P02654 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
APOC1P02654 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
APOC1P02654 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
APOC1P02654 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.75■□□□□ 0.75
APOC1P02654 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
APOC1P02654 AC103724.3-201ENST00000564481 992 ntBASIC19.75■□□□□ 0.75
APOC1P02654 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.75■□□□□ 0.75
APOC1P02654 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
APOC1P02654 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
APOC1P02654 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
APOC1P02654 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
APOC1P02654 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
APOC1P02654 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.75■□□□□ 0.75
APOC1P02654 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.75■□□□□ 0.75
APOC1P02654 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
APOC1P02654 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
APOC1P02654 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
APOC1P02654 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.74■□□□□ 0.75
APOC1P02654 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
APOC1P02654 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
APOC1P02654 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
APOC1P02654 AL024507.2-201ENST00000606070 2574 ntBASIC19.74■□□□□ 0.75
APOC1P02654 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.74■□□□□ 0.75
APOC1P02654 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
APOC1P02654 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
APOC1P02654 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
APOC1P02654 AC137630.3-201ENST00000607245 391 ntBASIC19.74■□□□□ 0.75
APOC1P02654 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
APOC1P02654 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
APOC1P02654 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
APOC1P02654 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
APOC1P02654 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
APOC1P02654 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
APOC1P02654 KRT8P33-201ENST00000508125 1423 ntBASIC19.74■□□□□ 0.75
APOC1P02654 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
APOC1P02654 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
APOC1P02654 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
APOC1P02654 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
APOC1P02654 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.73■□□□□ 0.75
APOC1P02654 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
APOC1P02654 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.73■□□□□ 0.75
APOC1P02654 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.73■□□□□ 0.75
APOC1P02654 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
APOC1P02654 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
APOC1P02654 AL031848.2-201ENST00000607670 837 ntBASIC19.73■□□□□ 0.75
APOC1P02654 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.73■□□□□ 0.75
APOC1P02654 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.73■□□□□ 0.75
APOC1P02654 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
APOC1P02654 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
APOC1P02654 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
APOC1P02654 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.73■□□□□ 0.75
APOC1P02654 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
APOC1P02654 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
APOC1P02654 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.72■□□□□ 0.75
APOC1P02654 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
APOC1P02654 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
APOC1P02654 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
APOC1P02654 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
APOC1P02654 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
APOC1P02654 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.72■□□□□ 0.75
APOC1P02654 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
APOC1P02654 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
APOC1P02654 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
APOC1P02654 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
APOC1P02654 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
APOC1P02654 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
APOC1P02654 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
APOC1P02654 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
APOC1P02654 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
APOC1P02654 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.71■□□□□ 0.75
APOC1P02654 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
APOC1P02654 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
APOC1P02654 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
APOC1P02654 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
APOC1P02654 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.71■□□□□ 0.75
APOC1P02654 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.71■□□□□ 0.75
APOC1P02654 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.71■□□□□ 0.75
APOC1P02654 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.71■□□□□ 0.75
APOC1P02654 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
APOC1P02654 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.71■□□□□ 0.75
APOC1P02654 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
APOC1P02654 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.71■□□□□ 0.75
APOC1P02654 AC068473.5-201ENST00000616428 2072 ntBASIC19.71■□□□□ 0.75
APOC1P02654 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
APOC1P02654 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.7■□□□□ 0.74
APOC1P02654 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
APOC1P02654 DUSP8P3-201ENST00000399571 1760 ntBASIC19.7■□□□□ 0.74
APOC1P02654 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
APOC1P02654 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
APOC1P02654 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
APOC1P02654 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.7■□□□□ 0.74
APOC1P02654 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.7■□□□□ 0.74
APOC1P02654 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
APOC1P02654 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
APOC1P02654 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.7■□□□□ 0.74
APOC1P02654 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
APOC1P02654 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
APOC1P02654 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms