Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DQA1P01909 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DQA1P01909 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DQA1P01909 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC16.88■□□□□ 0.29
HLA-DQA1P01909 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC16.88■□□□□ 0.29
HLA-DQA1P01909 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DQA1P01909 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DQA1P01909 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DQA1P01909 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC16.88■□□□□ 0.29
HLA-DQA1P01909 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DQA1P01909 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DQA1P01909 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DQA1P01909 AC092053.2-201ENST00000640557 1818 ntBASIC16.87■□□□□ 0.29
HLA-DQA1P01909 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DQA1P01909 AL359258.2-201ENST00000564063 1566 ntBASIC16.87■□□□□ 0.29
HLA-DQA1P01909 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
HLA-DQA1P01909 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DQA1P01909 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DQA1P01909 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC16.87■□□□□ 0.29
HLA-DQA1P01909 DUX4L11-201ENST00000611504 1267 ntBASIC16.87■□□□□ 0.29
HLA-DQA1P01909 DUX4L12-201ENST00000614593 1267 ntBASIC16.87■□□□□ 0.29
HLA-DQA1P01909 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC16.87■□□□□ 0.29
HLA-DQA1P01909 DUX4L14-201ENST00000621227 1267 ntBASIC16.87■□□□□ 0.29
HLA-DQA1P01909 CHML-204ENST00000638121 920 ntTSL 2 BASIC16.87■□□□□ 0.29
HLA-DQA1P01909 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC16.87■□□□□ 0.29
HLA-DQA1P01909 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC16.87■□□□□ 0.29
HLA-DQA1P01909 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DQA1P01909 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DQA1P01909 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DQA1P01909 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
HLA-DQA1P01909 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQA1P01909 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQA1P01909 COMT-203ENST00000403184 2217 ntTSL 2 BASIC16.86■□□□□ 0.29
HLA-DQA1P01909 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC16.86■□□□□ 0.29
HLA-DQA1P01909 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQA1P01909 GCA-201ENST00000233612 1694 ntTSL 2 BASIC16.86■□□□□ 0.29
HLA-DQA1P01909 CHST11-202ENST00000546689 756 ntTSL 2 BASIC16.86■□□□□ 0.29
HLA-DQA1P01909 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQA1P01909 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQA1P01909 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQA1P01909 AC073130.3-201ENST00000624389 2278 ntBASIC16.86■□□□□ 0.29
HLA-DQA1P01909 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQA1P01909 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQA1P01909 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC16.86■□□□□ 0.29
HLA-DQA1P01909 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.86■□□□□ 0.29
HLA-DQA1P01909 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQA1P01909 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQA1P01909 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQA1P01909 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQA1P01909 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQA1P01909 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQA1P01909 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
HLA-DQA1P01909 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
HLA-DQA1P01909 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC16.85■□□□□ 0.29
HLA-DQA1P01909 RNF166-209ENST00000567844 633 ntTSL 5 BASIC16.85■□□□□ 0.29
HLA-DQA1P01909 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQA1P01909 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
HLA-DQA1P01909 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
HLA-DQA1P01909 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQA1P01909 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQA1P01909 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC16.85■□□□□ 0.29
HLA-DQA1P01909 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQA1P01909 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQA1P01909 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQA1P01909 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQA1P01909 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQA1P01909 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC16.84■□□□□ 0.29
HLA-DQA1P01909 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC16.84■□□□□ 0.29
HLA-DQA1P01909 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
HLA-DQA1P01909 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQA1P01909 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.84■□□□□ 0.29
HLA-DQA1P01909 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC16.84■□□□□ 0.29
HLA-DQA1P01909 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQA1P01909 FBXW4P1-201ENST00000426721 2239 ntBASIC16.84■□□□□ 0.29
HLA-DQA1P01909 PALM-208ENST00000592155 2272 ntTSL 4 BASIC16.84■□□□□ 0.29
HLA-DQA1P01909 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
HLA-DQA1P01909 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HLA-DQA1P01909 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DQA1P01909 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
HLA-DQA1P01909 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DQA1P01909 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
HLA-DQA1P01909 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC16.83■□□□□ 0.28
HLA-DQA1P01909 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DQA1P01909 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQA1P01909 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC16.82■□□□□ 0.28
HLA-DQA1P01909 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQA1P01909 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQA1P01909 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC16.82■□□□□ 0.28
HLA-DQA1P01909 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQA1P01909 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQA1P01909 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC16.82■□□□□ 0.28
HLA-DQA1P01909 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQA1P01909 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQA1P01909 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQA1P01909 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQA1P01909 AC092667.1-201ENST00000434301 2586 ntBASIC16.82■□□□□ 0.28
HLA-DQA1P01909 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQA1P01909 DUX4L13-201ENST00000554103 1267 ntBASIC16.82■□□□□ 0.28
HLA-DQA1P01909 DUX4L15-201ENST00000611059 1267 ntBASIC16.82■□□□□ 0.28
HLA-DQA1P01909 DUX4L23-201ENST00000615195 1269 ntBASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms