Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNX4O95219 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNX4O95219 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.97■□□□□ 0.95
SNX4O95219 AL356740.2-201ENST00000601559 647 ntBASIC20.97■□□□□ 0.95
SNX4O95219 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SNX4O95219 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNX4O95219 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNX4O95219 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.97■□□□□ 0.95
SNX4O95219 AC141586.4-201ENST00000624558 1573 ntBASIC20.97■□□□□ 0.95
SNX4O95219 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNX4O95219 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNX4O95219 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
SNX4O95219 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.96■□□□□ 0.95
SNX4O95219 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SNX4O95219 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNX4O95219 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNX4O95219 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNX4O95219 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNX4O95219 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SNX4O95219 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
SNX4O95219 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
SNX4O95219 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
SNX4O95219 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNX4O95219 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SNX4O95219 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNX4O95219 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SNX4O95219 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SNX4O95219 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SNX4O95219 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNX4O95219 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.95■□□□□ 0.94
SNX4O95219 MIR3621-201ENST00000580529 85 ntBASIC20.95■□□□□ 0.94
SNX4O95219 AL117332.1-201ENST00000622628 974 ntBASIC20.95■□□□□ 0.94
SNX4O95219 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SNX4O95219 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNX4O95219 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNX4O95219 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.95■□□□□ 0.94
SNX4O95219 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SNX4O95219 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
SNX4O95219 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.94■□□□□ 0.94
SNX4O95219 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNX4O95219 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
SNX4O95219 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
SNX4O95219 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.94■□□□□ 0.94
SNX4O95219 AC005703.6-201ENST00000623265 1329 ntBASIC20.94■□□□□ 0.94
SNX4O95219 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SNX4O95219 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.94■□□□□ 0.94
SNX4O95219 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.94■□□□□ 0.94
SNX4O95219 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SNX4O95219 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNX4O95219 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.94■□□□□ 0.94
SNX4O95219 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.93■□□□□ 0.94
SNX4O95219 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.93■□□□□ 0.94
SNX4O95219 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNX4O95219 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNX4O95219 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.93■□□□□ 0.94
SNX4O95219 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNX4O95219 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.93■□□□□ 0.94
SNX4O95219 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.93■□□□□ 0.94
SNX4O95219 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.93■□□□□ 0.94
SNX4O95219 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.93■□□□□ 0.94
SNX4O95219 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SNX4O95219 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNX4O95219 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNX4O95219 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNX4O95219 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.93■□□□□ 0.94
SNX4O95219 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SNX4O95219 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNX4O95219 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNX4O95219 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNX4O95219 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.92■□□□□ 0.94
SNX4O95219 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.92■□□□□ 0.94
SNX4O95219 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.92■□□□□ 0.94
SNX4O95219 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SNX4O95219 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SNX4O95219 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SNX4O95219 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNX4O95219 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.92■□□□□ 0.94
SNX4O95219 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.92■□□□□ 0.94
SNX4O95219 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNX4O95219 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SNX4O95219 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SNX4O95219 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SNX4O95219 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
SNX4O95219 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.91■□□□□ 0.94
SNX4O95219 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.91■□□□□ 0.94
SNX4O95219 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.91■□□□□ 0.94
SNX4O95219 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SNX4O95219 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
SNX4O95219 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SNX4O95219 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
SNX4O95219 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SNX4O95219 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SNX4O95219 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.9■□□□□ 0.94
SNX4O95219 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.9■□□□□ 0.94
SNX4O95219 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SNX4O95219 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.9■□□□□ 0.94
SNX4O95219 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SNX4O95219 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SNX4O95219 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SNX4O95219 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms