Protein–RNA interactions for Protein: O60479

DLX3, Homeobox protein DLX-3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DLX3O60479 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC22.09■■□□□ 1.13
DLX3O60479 AC010980.1-201ENST00000587192 1142 ntBASIC22.09■■□□□ 1.13
DLX3O60479 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
DLX3O60479 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
DLX3O60479 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
DLX3O60479 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
DLX3O60479 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
DLX3O60479 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
DLX3O60479 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
DLX3O60479 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC22.08■■□□□ 1.13
DLX3O60479 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.08■■□□□ 1.13
DLX3O60479 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
DLX3O60479 LINC00526-201ENST00000581067 1875 ntBASIC22.08■■□□□ 1.13
DLX3O60479 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
DLX3O60479 LINC00565-201ENST00000562710 2331 ntBASIC22.08■■□□□ 1.12
DLX3O60479 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.08■■□□□ 1.12
DLX3O60479 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
DLX3O60479 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
DLX3O60479 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
DLX3O60479 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
DLX3O60479 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
DLX3O60479 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.07■■□□□ 1.12
DLX3O60479 LSR-203ENST00000360798 1963 ntTSL 2 BASIC22.07■■□□□ 1.12
DLX3O60479 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
DLX3O60479 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
DLX3O60479 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
DLX3O60479 CLDN5-201ENST00000403084 2357 ntBASIC22.07■■□□□ 1.12
DLX3O60479 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
DLX3O60479 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
DLX3O60479 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
DLX3O60479 ECEL1P1-201ENST00000373592 1742 ntBASIC22.06■■□□□ 1.12
DLX3O60479 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
DLX3O60479 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
DLX3O60479 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
DLX3O60479 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC22.05■■□□□ 1.12
DLX3O60479 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.05■■□□□ 1.12
DLX3O60479 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
DLX3O60479 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
DLX3O60479 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC22.05■■□□□ 1.12
DLX3O60479 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
DLX3O60479 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
DLX3O60479 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
DLX3O60479 TSPY13P-201ENST00000338964 914 ntBASIC22.05■■□□□ 1.12
DLX3O60479 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC22.05■■□□□ 1.12
DLX3O60479 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC22.05■■□□□ 1.12
DLX3O60479 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC22.05■■□□□ 1.12
DLX3O60479 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
DLX3O60479 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
DLX3O60479 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
DLX3O60479 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC22.04■■□□□ 1.12
DLX3O60479 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.04■■□□□ 1.12
DLX3O60479 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
DLX3O60479 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
DLX3O60479 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
DLX3O60479 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC22.03■■□□□ 1.12
DLX3O60479 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
DLX3O60479 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.03■■□□□ 1.12
DLX3O60479 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
DLX3O60479 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
DLX3O60479 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC22.03■■□□□ 1.12
DLX3O60479 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
DLX3O60479 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.03■■□□□ 1.12
DLX3O60479 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
DLX3O60479 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
DLX3O60479 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.02■■□□□ 1.12
DLX3O60479 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
DLX3O60479 AL353803.4-201ENST00000565882 1934 ntBASIC22.02■■□□□ 1.11
DLX3O60479 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.11
DLX3O60479 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
DLX3O60479 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
DLX3O60479 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
DLX3O60479 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
DLX3O60479 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
DLX3O60479 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
DLX3O60479 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
DLX3O60479 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
DLX3O60479 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
DLX3O60479 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC22.01■■□□□ 1.11
DLX3O60479 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
DLX3O60479 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
DLX3O60479 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC22.01■■□□□ 1.11
DLX3O60479 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC22.01■■□□□ 1.11
DLX3O60479 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC22.01■■□□□ 1.11
DLX3O60479 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
DLX3O60479 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
DLX3O60479 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC22.01■■□□□ 1.11
DLX3O60479 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC22.01■■□□□ 1.11
DLX3O60479 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
DLX3O60479 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
DLX3O60479 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
DLX3O60479 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
DLX3O60479 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC22■■□□□ 1.11
DLX3O60479 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
DLX3O60479 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
DLX3O60479 GUK1-208ENST00000366728 842 ntTSL 2 BASIC22■■□□□ 1.11
DLX3O60479 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
DLX3O60479 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
DLX3O60479 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC22■■□□□ 1.11
DLX3O60479 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22■■□□□ 1.11
DLX3O60479 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms