Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SSSCA1O60232 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSSCA1O60232 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SSSCA1O60232 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SSSCA1O60232 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSSCA1O60232 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SSSCA1O60232 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC18.31■□□□□ 0.52
SSSCA1O60232 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SSSCA1O60232 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SSSCA1O60232 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSSCA1O60232 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSSCA1O60232 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSSCA1O60232 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.31■□□□□ 0.52
SSSCA1O60232 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SSSCA1O60232 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SSSCA1O60232 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSSCA1O60232 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSSCA1O60232 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SSSCA1O60232 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
SSSCA1O60232 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSSCA1O60232 TPT1-202ENST00000379055 948 ntTSL 2 BASIC18.3■□□□□ 0.52
SSSCA1O60232 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SSSCA1O60232 AC007029.1-201ENST00000604183 313 ntBASIC18.3■□□□□ 0.52
SSSCA1O60232 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSSCA1O60232 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.3■□□□□ 0.52
SSSCA1O60232 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SSSCA1O60232 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.3■□□□□ 0.52
SSSCA1O60232 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSSCA1O60232 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.3■□□□□ 0.52
SSSCA1O60232 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSSCA1O60232 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSSCA1O60232 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SSSCA1O60232 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSSCA1O60232 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
SSSCA1O60232 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSSCA1O60232 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSSCA1O60232 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSSCA1O60232 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSSCA1O60232 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSSCA1O60232 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSSCA1O60232 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SSSCA1O60232 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSSCA1O60232 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SSSCA1O60232 AL024507.2-201ENST00000606070 2574 ntBASIC18.29■□□□□ 0.52
SSSCA1O60232 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSSCA1O60232 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
SSSCA1O60232 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.28■□□□□ 0.52
SSSCA1O60232 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSSCA1O60232 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.28■□□□□ 0.52
SSSCA1O60232 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSSCA1O60232 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
SSSCA1O60232 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SSSCA1O60232 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSSCA1O60232 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSSCA1O60232 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SSSCA1O60232 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSSCA1O60232 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSSCA1O60232 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SSSCA1O60232 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC18.28■□□□□ 0.52
SSSCA1O60232 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.28■□□□□ 0.52
SSSCA1O60232 RAP2CP1-202ENST00000605179 643 ntBASIC18.28■□□□□ 0.52
SSSCA1O60232 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSSCA1O60232 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.28■□□□□ 0.52
SSSCA1O60232 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SSSCA1O60232 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSSCA1O60232 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSSCA1O60232 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
SSSCA1O60232 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SSSCA1O60232 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SSSCA1O60232 AL137060.1-201ENST00000618151 2648 ntBASIC18.27■□□□□ 0.52
SSSCA1O60232 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
SSSCA1O60232 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
SSSCA1O60232 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SSSCA1O60232 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.27■□□□□ 0.52
SSSCA1O60232 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SSSCA1O60232 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SSSCA1O60232 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SSSCA1O60232 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SSSCA1O60232 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SSSCA1O60232 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SSSCA1O60232 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.26■□□□□ 0.51
SSSCA1O60232 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SSSCA1O60232 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SSSCA1O60232 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.26■□□□□ 0.51
SSSCA1O60232 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.26■□□□□ 0.51
SSSCA1O60232 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SSSCA1O60232 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SSSCA1O60232 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SSSCA1O60232 AC026202.3-201ENST00000600805 1127 ntBASIC18.26■□□□□ 0.51
SSSCA1O60232 ESRRAP2-201ENST00000418437 1549 ntBASIC18.26■□□□□ 0.51
SSSCA1O60232 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
SSSCA1O60232 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SSSCA1O60232 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SSSCA1O60232 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SSSCA1O60232 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
SSSCA1O60232 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SSSCA1O60232 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SSSCA1O60232 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SSSCA1O60232 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SSSCA1O60232 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms