Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ARHGEF9O43307 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ARHGEF9O43307 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ARHGEF9O43307 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ARHGEF9O43307 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.67■□□□□ 0.9
ARHGEF9O43307 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
ARHGEF9O43307 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.66■□□□□ 0.9
ARHGEF9O43307 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ARHGEF9O43307 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
ARHGEF9O43307 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ARHGEF9O43307 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
ARHGEF9O43307 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.66■□□□□ 0.9
ARHGEF9O43307 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.66■□□□□ 0.9
ARHGEF9O43307 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.66■□□□□ 0.9
ARHGEF9O43307 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
ARHGEF9O43307 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ARHGEF9O43307 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ARHGEF9O43307 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ARHGEF9O43307 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.65■□□□□ 0.9
ARHGEF9O43307 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
ARHGEF9O43307 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ARHGEF9O43307 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ARHGEF9O43307 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ARHGEF9O43307 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.65■□□□□ 0.9
ARHGEF9O43307 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.65■□□□□ 0.9
ARHGEF9O43307 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ARHGEF9O43307 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.64■□□□□ 0.89
ARHGEF9O43307 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ARHGEF9O43307 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ARHGEF9O43307 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.64■□□□□ 0.89
ARHGEF9O43307 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ARHGEF9O43307 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ARHGEF9O43307 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ARHGEF9O43307 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARHGEF9O43307 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARHGEF9O43307 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
ARHGEF9O43307 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARHGEF9O43307 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARHGEF9O43307 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ARHGEF9O43307 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARHGEF9O43307 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ARHGEF9O43307 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.63■□□□□ 0.89
ARHGEF9O43307 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARHGEF9O43307 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARHGEF9O43307 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARHGEF9O43307 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
ARHGEF9O43307 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARHGEF9O43307 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARHGEF9O43307 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARHGEF9O43307 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
ARHGEF9O43307 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARHGEF9O43307 BX664725.1-201ENST00000438252 379 ntBASIC20.62■□□□□ 0.89
ARHGEF9O43307 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.62■□□□□ 0.89
ARHGEF9O43307 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.62■□□□□ 0.89
ARHGEF9O43307 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARHGEF9O43307 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.62■□□□□ 0.89
ARHGEF9O43307 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
ARHGEF9O43307 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
ARHGEF9O43307 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.61■□□□□ 0.89
ARHGEF9O43307 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARHGEF9O43307 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARHGEF9O43307 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARHGEF9O43307 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ARHGEF9O43307 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ARHGEF9O43307 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.61■□□□□ 0.89
ARHGEF9O43307 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ARHGEF9O43307 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
ARHGEF9O43307 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
ARHGEF9O43307 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARHGEF9O43307 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
ARHGEF9O43307 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.6■□□□□ 0.89
ARHGEF9O43307 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARHGEF9O43307 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.6■□□□□ 0.89
ARHGEF9O43307 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
ARHGEF9O43307 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARHGEF9O43307 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ARHGEF9O43307 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ARHGEF9O43307 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARHGEF9O43307 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARHGEF9O43307 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ARHGEF9O43307 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.59■□□□□ 0.89
ARHGEF9O43307 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARHGEF9O43307 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARHGEF9O43307 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARHGEF9O43307 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARHGEF9O43307 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ARHGEF9O43307 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ARHGEF9O43307 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.58■□□□□ 0.89
ARHGEF9O43307 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.58■□□□□ 0.89
ARHGEF9O43307 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.58■□□□□ 0.88
ARHGEF9O43307 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ARHGEF9O43307 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ARHGEF9O43307 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ARHGEF9O43307 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ARHGEF9O43307 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ARHGEF9O43307 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGEF9O43307 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGEF9O43307 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGEF9O43307 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGEF9O43307 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms