Protein–RNA interactions for Protein: O14521

SDHD, Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDO14521 AC242852.2-201ENST00000615738 1807 ntBASIC21.78■■□□□ 1.08
SDHDO14521 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SDHDO14521 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SDHDO14521 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.78■■□□□ 1.08
SDHDO14521 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
SDHDO14521 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SDHDO14521 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SDHDO14521 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SDHDO14521 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SDHDO14521 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SDHDO14521 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SDHDO14521 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SDHDO14521 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
SDHDO14521 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.77■■□□□ 1.08
SDHDO14521 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SDHDO14521 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.77■■□□□ 1.08
SDHDO14521 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SDHDO14521 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.77■■□□□ 1.08
SDHDO14521 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SDHDO14521 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
SDHDO14521 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.77■■□□□ 1.07
SDHDO14521 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SDHDO14521 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
SDHDO14521 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.76■■□□□ 1.07
SDHDO14521 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SDHDO14521 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SDHDO14521 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SDHDO14521 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SDHDO14521 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SDHDO14521 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SDHDO14521 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SDHDO14521 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SDHDO14521 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SDHDO14521 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SDHDO14521 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SDHDO14521 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SDHDO14521 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SDHDO14521 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.75■■□□□ 1.07
SDHDO14521 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
SDHDO14521 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
SDHDO14521 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.75■■□□□ 1.07
SDHDO14521 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SDHDO14521 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SDHDO14521 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SDHDO14521 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SDHDO14521 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
SDHDO14521 RARRES2P2-201ENST00000394842 485 ntBASIC21.74■■□□□ 1.07
SDHDO14521 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.74■■□□□ 1.07
SDHDO14521 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
SDHDO14521 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.74■■□□□ 1.07
SDHDO14521 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SDHDO14521 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SDHDO14521 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SDHDO14521 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SDHDO14521 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SDHDO14521 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SDHDO14521 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SDHDO14521 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SDHDO14521 KRT18P60-201ENST00000312876 1297 ntBASIC21.73■■□□□ 1.07
SDHDO14521 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SDHDO14521 AC022616.5-201ENST00000518796 181 ntBASIC21.73■■□□□ 1.07
SDHDO14521 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SDHDO14521 AC019171.1-201ENST00000601251 1056 ntBASIC21.73■■□□□ 1.07
SDHDO14521 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SDHDO14521 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SDHDO14521 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SDHDO14521 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SDHDO14521 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SDHDO14521 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SDHDO14521 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.72■■□□□ 1.07
SDHDO14521 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SDHDO14521 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.72■■□□□ 1.07
SDHDO14521 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.72■■□□□ 1.07
SDHDO14521 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.72■■□□□ 1.07
SDHDO14521 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.72■■□□□ 1.07
SDHDO14521 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
SDHDO14521 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SDHDO14521 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SDHDO14521 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SDHDO14521 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
SDHDO14521 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SDHDO14521 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.71■■□□□ 1.07
SDHDO14521 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SDHDO14521 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SDHDO14521 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SDHDO14521 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
SDHDO14521 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
SDHDO14521 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.7■■□□□ 1.07
SDHDO14521 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
SDHDO14521 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SDHDO14521 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.7■■□□□ 1.06
SDHDO14521 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.7■■□□□ 1.06
SDHDO14521 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SDHDO14521 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
SDHDO14521 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SDHDO14521 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SDHDO14521 AF131216.4-201ENST00000638924 1588 ntBASIC21.7■■□□□ 1.06
SDHDO14521 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SDHDO14521 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SDHDO14521 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms