Protein–RNA interactions for Protein: O00189

AP4M1, AP-4 complex subunit mu-1, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4M1O00189 AC137767.1-201ENST00000602918 1920 ntBASIC18.38■□□□□ 0.53
AP4M1O00189 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC18.38■□□□□ 0.53
AP4M1O00189 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP4M1O00189 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.38■□□□□ 0.53
AP4M1O00189 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP4M1O00189 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.38■□□□□ 0.53
AP4M1O00189 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.38■□□□□ 0.53
AP4M1O00189 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP4M1O00189 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
AP4M1O00189 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP4M1O00189 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP4M1O00189 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP4M1O00189 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
AP4M1O00189 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP4M1O00189 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP4M1O00189 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.37■□□□□ 0.53
AP4M1O00189 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.37■□□□□ 0.53
AP4M1O00189 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
AP4M1O00189 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
AP4M1O00189 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.37■□□□□ 0.53
AP4M1O00189 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC18.37■□□□□ 0.53
AP4M1O00189 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
AP4M1O00189 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP4M1O00189 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.37■□□□□ 0.53
AP4M1O00189 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP4M1O00189 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP4M1O00189 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP4M1O00189 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
AP4M1O00189 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
AP4M1O00189 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
AP4M1O00189 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP4M1O00189 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
AP4M1O00189 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.36■□□□□ 0.53
AP4M1O00189 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
AP4M1O00189 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
AP4M1O00189 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
AP4M1O00189 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
AP4M1O00189 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
AP4M1O00189 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
AP4M1O00189 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP4M1O00189 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.35■□□□□ 0.53
AP4M1O00189 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.35■□□□□ 0.53
AP4M1O00189 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.35■□□□□ 0.53
AP4M1O00189 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP4M1O00189 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP4M1O00189 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
AP4M1O00189 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP4M1O00189 AC021242.3-201ENST00000607598 1377 ntBASIC18.34■□□□□ 0.53
AP4M1O00189 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP4M1O00189 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.34■□□□□ 0.53
AP4M1O00189 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.34■□□□□ 0.53
AP4M1O00189 MIR4787-201ENST00000607364 84 ntBASIC18.34■□□□□ 0.53
AP4M1O00189 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP4M1O00189 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
AP4M1O00189 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
AP4M1O00189 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.33■□□□□ 0.53
AP4M1O00189 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
AP4M1O00189 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
AP4M1O00189 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.33■□□□□ 0.52
AP4M1O00189 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.33■□□□□ 0.52
AP4M1O00189 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.33■□□□□ 0.52
AP4M1O00189 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.33■□□□□ 0.52
AP4M1O00189 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP4M1O00189 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP4M1O00189 AC007375.3-201ENST00000600936 2314 ntBASIC18.33■□□□□ 0.52
AP4M1O00189 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP4M1O00189 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
AP4M1O00189 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP4M1O00189 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP4M1O00189 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
AP4M1O00189 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP4M1O00189 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.32■□□□□ 0.52
AP4M1O00189 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP4M1O00189 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.32■□□□□ 0.52
AP4M1O00189 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP4M1O00189 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
AP4M1O00189 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP4M1O00189 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
AP4M1O00189 GUSBP5-201ENST00000418136 578 ntBASIC18.32■□□□□ 0.52
AP4M1O00189 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.32■□□□□ 0.52
AP4M1O00189 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP4M1O00189 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.32■□□□□ 0.52
AP4M1O00189 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP4M1O00189 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.32■□□□□ 0.52
AP4M1O00189 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
AP4M1O00189 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.31■□□□□ 0.52
AP4M1O00189 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
AP4M1O00189 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP4M1O00189 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
AP4M1O00189 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP4M1O00189 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP4M1O00189 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.31■□□□□ 0.52
AP4M1O00189 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
AP4M1O00189 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.3■□□□□ 0.52
AP4M1O00189 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
AP4M1O00189 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.3■□□□□ 0.52
AP4M1O00189 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.3■□□□□ 0.52
AP4M1O00189 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.3■□□□□ 0.52
AP4M1O00189 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP4M1O00189 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms