Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
NPIPA3F8WFD2 AC004812.2-201ENST00000611079 2094 ntBASIC20.44■□□□□ 0.86
NPIPA3F8WFD2 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPIPA3F8WFD2 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
NPIPA3F8WFD2 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NPIPA3F8WFD2 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NPIPA3F8WFD2 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NPIPA3F8WFD2 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.43■□□□□ 0.86
NPIPA3F8WFD2 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NPIPA3F8WFD2 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NPIPA3F8WFD2 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NPIPA3F8WFD2 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NPIPA3F8WFD2 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NPIPA3F8WFD2 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NPIPA3F8WFD2 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.42■□□□□ 0.86
NPIPA3F8WFD2 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NPIPA3F8WFD2 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
NPIPA3F8WFD2 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.42■□□□□ 0.86
NPIPA3F8WFD2 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NPIPA3F8WFD2 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NPIPA3F8WFD2 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.42■□□□□ 0.86
NPIPA3F8WFD2 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
NPIPA3F8WFD2 AF213884.3-201ENST00000563833 479 ntBASIC20.42■□□□□ 0.86
NPIPA3F8WFD2 MIR4767-201ENST00000582827 78 ntBASIC20.42■□□□□ 0.86
NPIPA3F8WFD2 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.42■□□□□ 0.86
NPIPA3F8WFD2 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
NPIPA3F8WFD2 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NPIPA3F8WFD2 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
NPIPA3F8WFD2 C17orf82-201ENST00000623772 1530 ntBASIC20.42■□□□□ 0.86
NPIPA3F8WFD2 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
NPIPA3F8WFD2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.42■□□□□ 0.86
NPIPA3F8WFD2 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NPIPA3F8WFD2 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
NPIPA3F8WFD2 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NPIPA3F8WFD2 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.41■□□□□ 0.86
NPIPA3F8WFD2 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NPIPA3F8WFD2 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.41■□□□□ 0.86
NPIPA3F8WFD2 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NPIPA3F8WFD2 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.41■□□□□ 0.86
NPIPA3F8WFD2 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.41■□□□□ 0.86
NPIPA3F8WFD2 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.41■□□□□ 0.86
NPIPA3F8WFD2 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
NPIPA3F8WFD2 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NPIPA3F8WFD2 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NPIPA3F8WFD2 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NPIPA3F8WFD2 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NPIPA3F8WFD2 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NPIPA3F8WFD2 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.41■□□□□ 0.86
NPIPA3F8WFD2 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
NPIPA3F8WFD2 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NPIPA3F8WFD2 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NPIPA3F8WFD2 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NPIPA3F8WFD2 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NPIPA3F8WFD2 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NPIPA3F8WFD2 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.4■□□□□ 0.86
NPIPA3F8WFD2 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NPIPA3F8WFD2 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
NPIPA3F8WFD2 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
NPIPA3F8WFD2 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NPIPA3F8WFD2 AL136967.2-201ENST00000623968 743 ntBASIC20.4■□□□□ 0.86
NPIPA3F8WFD2 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
NPIPA3F8WFD2 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NPIPA3F8WFD2 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.39■□□□□ 0.86
NPIPA3F8WFD2 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
NPIPA3F8WFD2 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.39■□□□□ 0.85
NPIPA3F8WFD2 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.39■□□□□ 0.85
NPIPA3F8WFD2 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.39■□□□□ 0.85
NPIPA3F8WFD2 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NPIPA3F8WFD2 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.39■□□□□ 0.85
NPIPA3F8WFD2 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NPIPA3F8WFD2 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
NPIPA3F8WFD2 ALDH1A3-203ENST00000557963 1670 ntBASIC20.38■□□□□ 0.85
NPIPA3F8WFD2 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NPIPA3F8WFD2 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NPIPA3F8WFD2 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NPIPA3F8WFD2 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NPIPA3F8WFD2 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.38■□□□□ 0.85
NPIPA3F8WFD2 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NPIPA3F8WFD2 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NPIPA3F8WFD2 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NPIPA3F8WFD2 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.38■□□□□ 0.85
NPIPA3F8WFD2 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NPIPA3F8WFD2 AC105265.2-201ENST00000467189 838 ntBASIC20.38■□□□□ 0.85
NPIPA3F8WFD2 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.38■□□□□ 0.85
NPIPA3F8WFD2 AP001330.3-201ENST00000520123 633 ntBASIC20.38■□□□□ 0.85
NPIPA3F8WFD2 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.38■□□□□ 0.85
NPIPA3F8WFD2 AC241377.3-202ENST00000626088 1088 ntBASIC20.38■□□□□ 0.85
NPIPA3F8WFD2 AC241585.3-202ENST00000628937 1088 ntBASIC20.38■□□□□ 0.85
NPIPA3F8WFD2 AC245100.8-202ENST00000629247 1058 ntBASIC20.38■□□□□ 0.85
NPIPA3F8WFD2 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NPIPA3F8WFD2 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
NPIPA3F8WFD2 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NPIPA3F8WFD2 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NPIPA3F8WFD2 ABCB10P4-201ENST00000566803 2184 ntBASIC20.38■□□□□ 0.85
NPIPA3F8WFD2 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NPIPA3F8WFD2 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NPIPA3F8WFD2 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
NPIPA3F8WFD2 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NPIPA3F8WFD2 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
NPIPA3F8WFD2 MIR939-201ENST00000401314 82 ntBASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms