Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
NPIPA2E9PIF3 AC004812.2-201ENST00000611079 2094 ntBASIC20.44■□□□□ 0.86
NPIPA2E9PIF3 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPIPA2E9PIF3 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
NPIPA2E9PIF3 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NPIPA2E9PIF3 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NPIPA2E9PIF3 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NPIPA2E9PIF3 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.43■□□□□ 0.86
NPIPA2E9PIF3 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NPIPA2E9PIF3 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NPIPA2E9PIF3 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NPIPA2E9PIF3 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NPIPA2E9PIF3 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NPIPA2E9PIF3 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NPIPA2E9PIF3 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.42■□□□□ 0.86
NPIPA2E9PIF3 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NPIPA2E9PIF3 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
NPIPA2E9PIF3 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.42■□□□□ 0.86
NPIPA2E9PIF3 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NPIPA2E9PIF3 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NPIPA2E9PIF3 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.42■□□□□ 0.86
NPIPA2E9PIF3 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
NPIPA2E9PIF3 AF213884.3-201ENST00000563833 479 ntBASIC20.42■□□□□ 0.86
NPIPA2E9PIF3 MIR4767-201ENST00000582827 78 ntBASIC20.42■□□□□ 0.86
NPIPA2E9PIF3 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.42■□□□□ 0.86
NPIPA2E9PIF3 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
NPIPA2E9PIF3 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NPIPA2E9PIF3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
NPIPA2E9PIF3 C17orf82-201ENST00000623772 1530 ntBASIC20.42■□□□□ 0.86
NPIPA2E9PIF3 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
NPIPA2E9PIF3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.42■□□□□ 0.86
NPIPA2E9PIF3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NPIPA2E9PIF3 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
NPIPA2E9PIF3 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NPIPA2E9PIF3 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.41■□□□□ 0.86
NPIPA2E9PIF3 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NPIPA2E9PIF3 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.41■□□□□ 0.86
NPIPA2E9PIF3 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NPIPA2E9PIF3 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.41■□□□□ 0.86
NPIPA2E9PIF3 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.41■□□□□ 0.86
NPIPA2E9PIF3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.41■□□□□ 0.86
NPIPA2E9PIF3 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
NPIPA2E9PIF3 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NPIPA2E9PIF3 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NPIPA2E9PIF3 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NPIPA2E9PIF3 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NPIPA2E9PIF3 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NPIPA2E9PIF3 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.41■□□□□ 0.86
NPIPA2E9PIF3 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
NPIPA2E9PIF3 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NPIPA2E9PIF3 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NPIPA2E9PIF3 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NPIPA2E9PIF3 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NPIPA2E9PIF3 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NPIPA2E9PIF3 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.4■□□□□ 0.86
NPIPA2E9PIF3 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NPIPA2E9PIF3 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
NPIPA2E9PIF3 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
NPIPA2E9PIF3 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NPIPA2E9PIF3 AL136967.2-201ENST00000623968 743 ntBASIC20.4■□□□□ 0.86
NPIPA2E9PIF3 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
NPIPA2E9PIF3 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NPIPA2E9PIF3 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.39■□□□□ 0.86
NPIPA2E9PIF3 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
NPIPA2E9PIF3 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.39■□□□□ 0.85
NPIPA2E9PIF3 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.39■□□□□ 0.85
NPIPA2E9PIF3 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.39■□□□□ 0.85
NPIPA2E9PIF3 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NPIPA2E9PIF3 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.39■□□□□ 0.85
NPIPA2E9PIF3 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NPIPA2E9PIF3 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
NPIPA2E9PIF3 ALDH1A3-203ENST00000557963 1670 ntBASIC20.38■□□□□ 0.85
NPIPA2E9PIF3 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NPIPA2E9PIF3 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NPIPA2E9PIF3 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NPIPA2E9PIF3 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NPIPA2E9PIF3 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.38■□□□□ 0.85
NPIPA2E9PIF3 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NPIPA2E9PIF3 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NPIPA2E9PIF3 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NPIPA2E9PIF3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.38■□□□□ 0.85
NPIPA2E9PIF3 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NPIPA2E9PIF3 AC105265.2-201ENST00000467189 838 ntBASIC20.38■□□□□ 0.85
NPIPA2E9PIF3 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.38■□□□□ 0.85
NPIPA2E9PIF3 AP001330.3-201ENST00000520123 633 ntBASIC20.38■□□□□ 0.85
NPIPA2E9PIF3 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.38■□□□□ 0.85
NPIPA2E9PIF3 AC241377.3-202ENST00000626088 1088 ntBASIC20.38■□□□□ 0.85
NPIPA2E9PIF3 AC241585.3-202ENST00000628937 1088 ntBASIC20.38■□□□□ 0.85
NPIPA2E9PIF3 AC245100.8-202ENST00000629247 1058 ntBASIC20.38■□□□□ 0.85
NPIPA2E9PIF3 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NPIPA2E9PIF3 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
NPIPA2E9PIF3 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NPIPA2E9PIF3 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NPIPA2E9PIF3 ABCB10P4-201ENST00000566803 2184 ntBASIC20.38■□□□□ 0.85
NPIPA2E9PIF3 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NPIPA2E9PIF3 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NPIPA2E9PIF3 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
NPIPA2E9PIF3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NPIPA2E9PIF3 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
NPIPA2E9PIF3 MIR939-201ENST00000401314 82 ntBASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 219.7 ms