Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MBD3L4A6NDZ8 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.95■□□□□ 0.78
MBD3L4A6NDZ8 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
MBD3L4A6NDZ8 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
MBD3L4A6NDZ8 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.95■□□□□ 0.78
MBD3L4A6NDZ8 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
MBD3L4A6NDZ8 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MBD3L4A6NDZ8 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MBD3L4A6NDZ8 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MBD3L4A6NDZ8 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.94■□□□□ 0.78
MBD3L4A6NDZ8 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
MBD3L4A6NDZ8 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MBD3L4A6NDZ8 AC026271.2-201ENST00000428091 497 ntBASIC19.94■□□□□ 0.78
MBD3L4A6NDZ8 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MBD3L4A6NDZ8 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.94■□□□□ 0.78
MBD3L4A6NDZ8 FP325331.1-202ENST00000623531 1380 ntBASIC19.94■□□□□ 0.78
MBD3L4A6NDZ8 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
MBD3L4A6NDZ8 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MBD3L4A6NDZ8 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.93■□□□□ 0.78
MBD3L4A6NDZ8 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.93■□□□□ 0.78
MBD3L4A6NDZ8 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
MBD3L4A6NDZ8 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
MBD3L4A6NDZ8 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MBD3L4A6NDZ8 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
MBD3L4A6NDZ8 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MBD3L4A6NDZ8 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
MBD3L4A6NDZ8 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MBD3L4A6NDZ8 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MBD3L4A6NDZ8 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
MBD3L4A6NDZ8 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.92■□□□□ 0.78
MBD3L4A6NDZ8 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.92■□□□□ 0.78
MBD3L4A6NDZ8 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MBD3L4A6NDZ8 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MBD3L4A6NDZ8 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
MBD3L4A6NDZ8 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MBD3L4A6NDZ8 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MBD3L4A6NDZ8 LINC00543-201ENST00000567234 1845 ntBASIC19.91■□□□□ 0.78
MBD3L4A6NDZ8 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.91■□□□□ 0.78
MBD3L4A6NDZ8 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MBD3L4A6NDZ8 DUX4L4-201ENST00000566884 1269 ntBASIC19.91■□□□□ 0.78
MBD3L4A6NDZ8 AL499627.2-201ENST00000606283 725 ntBASIC19.91■□□□□ 0.78
MBD3L4A6NDZ8 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
MBD3L4A6NDZ8 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MBD3L4A6NDZ8 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.91■□□□□ 0.78
MBD3L4A6NDZ8 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
MBD3L4A6NDZ8 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
MBD3L4A6NDZ8 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
MBD3L4A6NDZ8 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MBD3L4A6NDZ8 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
MBD3L4A6NDZ8 IRS3P-201ENST00000223076 1006 ntBASIC19.9■□□□□ 0.78
MBD3L4A6NDZ8 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
MBD3L4A6NDZ8 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.9■□□□□ 0.78
MBD3L4A6NDZ8 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MBD3L4A6NDZ8 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
MBD3L4A6NDZ8 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MBD3L4A6NDZ8 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
MBD3L4A6NDZ8 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
MBD3L4A6NDZ8 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MBD3L4A6NDZ8 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MBD3L4A6NDZ8 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MBD3L4A6NDZ8 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MBD3L4A6NDZ8 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.89■□□□□ 0.77
MBD3L4A6NDZ8 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
MBD3L4A6NDZ8 AC133637.1-201ENST00000624115 1537 ntBASIC19.89■□□□□ 0.77
MBD3L4A6NDZ8 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MBD3L4A6NDZ8 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MBD3L4A6NDZ8 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
MBD3L4A6NDZ8 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.88■□□□□ 0.77
MBD3L4A6NDZ8 AC144652.1-201ENST00000609974 1624 ntBASIC19.88■□□□□ 0.77
MBD3L4A6NDZ8 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MBD3L4A6NDZ8 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.88■□□□□ 0.77
MBD3L4A6NDZ8 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.88■□□□□ 0.77
MBD3L4A6NDZ8 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.88■□□□□ 0.77
MBD3L4A6NDZ8 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
MBD3L4A6NDZ8 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.87■□□□□ 0.77
MBD3L4A6NDZ8 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MBD3L4A6NDZ8 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MBD3L4A6NDZ8 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.87■□□□□ 0.77
MBD3L4A6NDZ8 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.87■□□□□ 0.77
MBD3L4A6NDZ8 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MBD3L4A6NDZ8 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MBD3L4A6NDZ8 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
MBD3L4A6NDZ8 SLC47A1P1-202ENST00000449666 945 ntBASIC19.87■□□□□ 0.77
MBD3L4A6NDZ8 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.87■□□□□ 0.77
MBD3L4A6NDZ8 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.87■□□□□ 0.77
MBD3L4A6NDZ8 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.87■□□□□ 0.77
MBD3L4A6NDZ8 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.87■□□□□ 0.77
MBD3L4A6NDZ8 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.86■□□□□ 0.77
MBD3L4A6NDZ8 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
MBD3L4A6NDZ8 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MBD3L4A6NDZ8 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.86■□□□□ 0.77
MBD3L4A6NDZ8 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MBD3L4A6NDZ8 LINC01124-201ENST00000409786 2117 ntBASIC19.86■□□□□ 0.77
MBD3L4A6NDZ8 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.86■□□□□ 0.77
MBD3L4A6NDZ8 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
MBD3L4A6NDZ8 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MBD3L4A6NDZ8 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.86■□□□□ 0.77
MBD3L4A6NDZ8 AC126544.1-201ENST00000580842 1059 ntBASIC19.86■□□□□ 0.77
MBD3L4A6NDZ8 MIR5787-201ENST00000611784 55 ntBASIC19.86■□□□□ 0.77
MBD3L4A6NDZ8 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 159.2 ms