Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
MEIS3P1A6NDR6 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MEIS3P1A6NDR6 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MEIS3P1A6NDR6 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MEIS3P1A6NDR6 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MEIS3P1A6NDR6 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
MEIS3P1A6NDR6 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MEIS3P1A6NDR6 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MEIS3P1A6NDR6 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.25■□□□□ 0.67
MEIS3P1A6NDR6 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MEIS3P1A6NDR6 AC090877.2-201ENST00000558441 1738 ntBASIC19.25■□□□□ 0.67
MEIS3P1A6NDR6 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MEIS3P1A6NDR6 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.25■□□□□ 0.67
MEIS3P1A6NDR6 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MEIS3P1A6NDR6 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.24■□□□□ 0.67
MEIS3P1A6NDR6 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
MEIS3P1A6NDR6 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.24■□□□□ 0.67
MEIS3P1A6NDR6 AC026202.3-201ENST00000600805 1127 ntBASIC19.24■□□□□ 0.67
MEIS3P1A6NDR6 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MEIS3P1A6NDR6 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MEIS3P1A6NDR6 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MEIS3P1A6NDR6 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MEIS3P1A6NDR6 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.24■□□□□ 0.67
MEIS3P1A6NDR6 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MEIS3P1A6NDR6 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.23■□□□□ 0.67
MEIS3P1A6NDR6 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
MEIS3P1A6NDR6 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MEIS3P1A6NDR6 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MEIS3P1A6NDR6 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MEIS3P1A6NDR6 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
MEIS3P1A6NDR6 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
MEIS3P1A6NDR6 AL024507.2-201ENST00000606070 2574 ntBASIC19.23■□□□□ 0.67
MEIS3P1A6NDR6 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
MEIS3P1A6NDR6 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.23■□□□□ 0.67
MEIS3P1A6NDR6 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MEIS3P1A6NDR6 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MEIS3P1A6NDR6 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MEIS3P1A6NDR6 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MEIS3P1A6NDR6 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MEIS3P1A6NDR6 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.22■□□□□ 0.67
MEIS3P1A6NDR6 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MEIS3P1A6NDR6 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
MEIS3P1A6NDR6 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
MEIS3P1A6NDR6 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MEIS3P1A6NDR6 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MEIS3P1A6NDR6 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.21■□□□□ 0.67
MEIS3P1A6NDR6 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MEIS3P1A6NDR6 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.21■□□□□ 0.67
MEIS3P1A6NDR6 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MEIS3P1A6NDR6 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
MEIS3P1A6NDR6 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MEIS3P1A6NDR6 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MEIS3P1A6NDR6 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MEIS3P1A6NDR6 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
MEIS3P1A6NDR6 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MEIS3P1A6NDR6 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MEIS3P1A6NDR6 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.21■□□□□ 0.67
MEIS3P1A6NDR6 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MEIS3P1A6NDR6 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.2■□□□□ 0.66
MEIS3P1A6NDR6 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MEIS3P1A6NDR6 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.2■□□□□ 0.66
MEIS3P1A6NDR6 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MEIS3P1A6NDR6 AL161729.1-201ENST00000604104 1402 ntBASIC19.2■□□□□ 0.66
MEIS3P1A6NDR6 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.2■□□□□ 0.66
MEIS3P1A6NDR6 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.2■□□□□ 0.66
MEIS3P1A6NDR6 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MEIS3P1A6NDR6 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MEIS3P1A6NDR6 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MEIS3P1A6NDR6 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.2■□□□□ 0.66
MEIS3P1A6NDR6 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MEIS3P1A6NDR6 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.19■□□□□ 0.66
MEIS3P1A6NDR6 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MEIS3P1A6NDR6 AC242852.2-201ENST00000615738 1807 ntBASIC19.19■□□□□ 0.66
MEIS3P1A6NDR6 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MEIS3P1A6NDR6 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.19■□□□□ 0.66
MEIS3P1A6NDR6 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MEIS3P1A6NDR6 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MEIS3P1A6NDR6 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MEIS3P1A6NDR6 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
MEIS3P1A6NDR6 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MEIS3P1A6NDR6 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MEIS3P1A6NDR6 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MEIS3P1A6NDR6 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
MEIS3P1A6NDR6 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MEIS3P1A6NDR6 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MEIS3P1A6NDR6 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.17■□□□□ 0.66
MEIS3P1A6NDR6 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MEIS3P1A6NDR6 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MEIS3P1A6NDR6 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.17■□□□□ 0.66
MEIS3P1A6NDR6 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
MEIS3P1A6NDR6 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.17■□□□□ 0.66
MEIS3P1A6NDR6 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.17■□□□□ 0.66
MEIS3P1A6NDR6 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
MEIS3P1A6NDR6 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MEIS3P1A6NDR6 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MEIS3P1A6NDR6 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MEIS3P1A6NDR6 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MEIS3P1A6NDR6 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.17■□□□□ 0.66
MEIS3P1A6NDR6 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MEIS3P1A6NDR6 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms