Protein–RNA interactions for Protein: A4UGR9

XIRP2, Xin actin-binding repeat-containing protein 2, humanhuman

Predictions only

Length 3,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XIRP2A4UGR9 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
XIRP2A4UGR9 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.85■■□□□ 1.41
XIRP2A4UGR9 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.85■■□□□ 1.41
XIRP2A4UGR9 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
XIRP2A4UGR9 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC23.84■■□□□ 1.41
XIRP2A4UGR9 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
XIRP2A4UGR9 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.84■■□□□ 1.41
XIRP2A4UGR9 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
XIRP2A4UGR9 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC23.83■■□□□ 1.41
XIRP2A4UGR9 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
XIRP2A4UGR9 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC23.83■■□□□ 1.41
XIRP2A4UGR9 AC142086.2-201ENST00000569753 217 ntBASIC23.83■■□□□ 1.41
XIRP2A4UGR9 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC23.83■■□□□ 1.41
XIRP2A4UGR9 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
XIRP2A4UGR9 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
XIRP2A4UGR9 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
XIRP2A4UGR9 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
XIRP2A4UGR9 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
XIRP2A4UGR9 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC23.83■■□□□ 1.41
XIRP2A4UGR9 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.83■■□□□ 1.41
XIRP2A4UGR9 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
XIRP2A4UGR9 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.4
XIRP2A4UGR9 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
XIRP2A4UGR9 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC23.83■■□□□ 1.4
XIRP2A4UGR9 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.83■■□□□ 1.4
XIRP2A4UGR9 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
XIRP2A4UGR9 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
XIRP2A4UGR9 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.4
XIRP2A4UGR9 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
XIRP2A4UGR9 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.82■■□□□ 1.4
XIRP2A4UGR9 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
XIRP2A4UGR9 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
XIRP2A4UGR9 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
XIRP2A4UGR9 NT5C3AP1-201ENST00000394500 1012 ntBASIC23.82■■□□□ 1.4
XIRP2A4UGR9 SLC6A10P-202ENST00000431994 2058 ntBASIC23.82■■□□□ 1.4
XIRP2A4UGR9 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
XIRP2A4UGR9 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
XIRP2A4UGR9 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
XIRP2A4UGR9 MIR572-201ENST00000384983 95 ntBASIC23.81■■□□□ 1.4
XIRP2A4UGR9 DBI-210ENST00000542275 757 ntTSL 5 BASIC23.81■■□□□ 1.4
XIRP2A4UGR9 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
XIRP2A4UGR9 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
XIRP2A4UGR9 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.81■■□□□ 1.4
XIRP2A4UGR9 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
XIRP2A4UGR9 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
XIRP2A4UGR9 AC016769.1-201ENST00000409132 1010 ntBASIC23.8■■□□□ 1.4
XIRP2A4UGR9 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.8■■□□□ 1.4
XIRP2A4UGR9 WT1-AS_3.1-201ENST00000613262 234 ntBASIC23.8■■□□□ 1.4
XIRP2A4UGR9 WWOX-218ENST00000627394 894 ntTSL 5 BASIC23.8■■□□□ 1.4
XIRP2A4UGR9 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
XIRP2A4UGR9 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
XIRP2A4UGR9 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
XIRP2A4UGR9 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
XIRP2A4UGR9 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
XIRP2A4UGR9 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.79■■□□□ 1.4
XIRP2A4UGR9 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
XIRP2A4UGR9 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
XIRP2A4UGR9 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
XIRP2A4UGR9 ARL16-209ENST00000573715 763 ntTSL 3 BASIC23.79■■□□□ 1.4
XIRP2A4UGR9 ARL16-211ENST00000576135 694 ntTSL 3 BASIC23.79■■□□□ 1.4
XIRP2A4UGR9 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
XIRP2A4UGR9 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
XIRP2A4UGR9 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
XIRP2A4UGR9 AP005435.1-201ENST00000529293 1178 ntBASIC23.78■■□□□ 1.4
XIRP2A4UGR9 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
XIRP2A4UGR9 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
XIRP2A4UGR9 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
XIRP2A4UGR9 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
XIRP2A4UGR9 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
XIRP2A4UGR9 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC23.78■■□□□ 1.4
XIRP2A4UGR9 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
XIRP2A4UGR9 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC23.78■■□□□ 1.4
XIRP2A4UGR9 pRNA.6-201ENST00000610482 90 ntBASIC23.78■■□□□ 1.4
XIRP2A4UGR9 pRNA.5-201ENST00000612139 90 ntBASIC23.78■■□□□ 1.4
XIRP2A4UGR9 pRNA.11-201ENST00000618423 90 ntBASIC23.78■■□□□ 1.4
XIRP2A4UGR9 pRNA.13-201ENST00000619112 90 ntBASIC23.78■■□□□ 1.4
XIRP2A4UGR9 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.77■■□□□ 1.4
XIRP2A4UGR9 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
XIRP2A4UGR9 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.77■■□□□ 1.4
XIRP2A4UGR9 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
XIRP2A4UGR9 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC23.77■■□□□ 1.4
XIRP2A4UGR9 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC23.77■■□□□ 1.4
XIRP2A4UGR9 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC23.77■■□□□ 1.4
XIRP2A4UGR9 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC23.77■■□□□ 1.4
XIRP2A4UGR9 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
XIRP2A4UGR9 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
XIRP2A4UGR9 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC23.77■■□□□ 1.4
XIRP2A4UGR9 MIR663A-201ENST00000385250 93 ntBASIC23.77■■□□□ 1.4
XIRP2A4UGR9 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.77■■□□□ 1.4
XIRP2A4UGR9 AC008687.6-201ENST00000596318 630 ntBASIC23.77■■□□□ 1.4
XIRP2A4UGR9 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
XIRP2A4UGR9 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.76■■□□□ 1.39
XIRP2A4UGR9 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
XIRP2A4UGR9 AC135731.1-201ENST00000569415 2548 ntBASIC23.76■■□□□ 1.39
XIRP2A4UGR9 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
XIRP2A4UGR9 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.76■■□□□ 1.39
XIRP2A4UGR9 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
XIRP2A4UGR9 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
XIRP2A4UGR9 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC23.75■■□□□ 1.39
XIRP2A4UGR9 AC006970.2-201ENST00000450065 779 ntBASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms