Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC32.68■■■□□ 2.82
CCDC144AA2RUR9 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
CCDC144AA2RUR9 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
CCDC144AA2RUR9 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
CCDC144AA2RUR9 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
CCDC144AA2RUR9 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
CCDC144AA2RUR9 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC32.67■■■□□ 2.82
CCDC144AA2RUR9 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
CCDC144AA2RUR9 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC32.66■■■□□ 2.82
CCDC144AA2RUR9 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC32.66■■■□□ 2.82
CCDC144AA2RUR9 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC32.66■■■□□ 2.82
CCDC144AA2RUR9 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
CCDC144AA2RUR9 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
CCDC144AA2RUR9 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC32.65■■■□□ 2.82
CCDC144AA2RUR9 MPST-208ENST00000628507 698 ntTSL 5 BASIC32.65■■■□□ 2.82
CCDC144AA2RUR9 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC32.65■■■□□ 2.82
CCDC144AA2RUR9 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
CCDC144AA2RUR9 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC32.64■■■□□ 2.82
CCDC144AA2RUR9 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
CCDC144AA2RUR9 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC32.64■■■□□ 2.82
CCDC144AA2RUR9 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
CCDC144AA2RUR9 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
CCDC144AA2RUR9 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC32.64■■■□□ 2.82
CCDC144AA2RUR9 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC32.64■■■□□ 2.82
CCDC144AA2RUR9 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC32.64■■■□□ 2.82
CCDC144AA2RUR9 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
CCDC144AA2RUR9 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
CCDC144AA2RUR9 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC32.64■■■□□ 2.82
CCDC144AA2RUR9 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
CCDC144AA2RUR9 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC32.64■■■□□ 2.81
CCDC144AA2RUR9 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC32.64■■■□□ 2.81
CCDC144AA2RUR9 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
CCDC144AA2RUR9 SLC47A1P1-202ENST00000449666 945 ntBASIC32.63■■■□□ 2.81
CCDC144AA2RUR9 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
CCDC144AA2RUR9 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
CCDC144AA2RUR9 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
CCDC144AA2RUR9 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
CCDC144AA2RUR9 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC32.62■■■□□ 2.81
CCDC144AA2RUR9 LINC00543-201ENST00000567234 1845 ntBASIC32.62■■■□□ 2.81
CCDC144AA2RUR9 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC32.61■■■□□ 2.81
CCDC144AA2RUR9 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC32.61■■■□□ 2.81
CCDC144AA2RUR9 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
CCDC144AA2RUR9 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
CCDC144AA2RUR9 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC32.6■■■□□ 2.81
CCDC144AA2RUR9 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC32.6■■■□□ 2.81
CCDC144AA2RUR9 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC32.6■■■□□ 2.81
CCDC144AA2RUR9 AC092666.2-201ENST00000613287 246 ntBASIC32.6■■■□□ 2.81
CCDC144AA2RUR9 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
CCDC144AA2RUR9 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC32.6■■■□□ 2.81
CCDC144AA2RUR9 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
CCDC144AA2RUR9 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC32.6■■■□□ 2.81
CCDC144AA2RUR9 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC32.6■■■□□ 2.81
CCDC144AA2RUR9 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC32.6■■■□□ 2.81
CCDC144AA2RUR9 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC32.6■■■□□ 2.81
CCDC144AA2RUR9 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC32.6■■■□□ 2.81
CCDC144AA2RUR9 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC32.6■■■□□ 2.81
CCDC144AA2RUR9 AL499627.2-201ENST00000606283 725 ntBASIC32.6■■■□□ 2.81
CCDC144AA2RUR9 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC32.59■■■□□ 2.81
CCDC144AA2RUR9 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC32.59■■■□□ 2.81
CCDC144AA2RUR9 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC32.59■■■□□ 2.81
CCDC144AA2RUR9 RHOF-204ENST00000537265 699 ntTSL 2 BASIC32.59■■■□□ 2.81
CCDC144AA2RUR9 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC32.58■■■□□ 2.81
CCDC144AA2RUR9 LINC01124-201ENST00000409786 2117 ntBASIC32.58■■■□□ 2.81
CCDC144AA2RUR9 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC32.58■■■□□ 2.81
CCDC144AA2RUR9 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC32.57■■■□□ 2.8
CCDC144AA2RUR9 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
CCDC144AA2RUR9 AC133637.1-201ENST00000624115 1537 ntBASIC32.57■■■□□ 2.8
CCDC144AA2RUR9 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC32.57■■■□□ 2.8
CCDC144AA2RUR9 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC32.57■■■□□ 2.8
CCDC144AA2RUR9 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
CCDC144AA2RUR9 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC32.57■■■□□ 2.8
CCDC144AA2RUR9 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
CCDC144AA2RUR9 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC32.57■■■□□ 2.8
CCDC144AA2RUR9 SHD-204ENST00000599689 1729 ntTSL 5 BASIC32.56■■■□□ 2.8
CCDC144AA2RUR9 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC32.56■■■□□ 2.8
CCDC144AA2RUR9 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC32.56■■■□□ 2.8
CCDC144AA2RUR9 AL139125.2-201ENST00000623134 1869 ntBASIC32.56■■■□□ 2.8
CCDC144AA2RUR9 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
CCDC144AA2RUR9 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
CCDC144AA2RUR9 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
CCDC144AA2RUR9 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC32.55■■■□□ 2.8
CCDC144AA2RUR9 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
CCDC144AA2RUR9 AC144652.1-201ENST00000609974 1624 ntBASIC32.55■■■□□ 2.8
CCDC144AA2RUR9 GRAMD4P2-201ENST00000423297 1097 ntBASIC32.55■■■□□ 2.8
CCDC144AA2RUR9 DUX4L4-201ENST00000566884 1269 ntBASIC32.55■■■□□ 2.8
CCDC144AA2RUR9 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
CCDC144AA2RUR9 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
CCDC144AA2RUR9 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC32.54■■■□□ 2.8
CCDC144AA2RUR9 IRS3P-201ENST00000223076 1006 ntBASIC32.54■■■□□ 2.8
CCDC144AA2RUR9 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC32.54■■■□□ 2.8
CCDC144AA2RUR9 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
CCDC144AA2RUR9 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
CCDC144AA2RUR9 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
CCDC144AA2RUR9 FP325331.1-202ENST00000623531 1380 ntBASIC32.54■■■□□ 2.8
CCDC144AA2RUR9 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
CCDC144AA2RUR9 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC32.54■■■□□ 2.8
CCDC144AA2RUR9 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC32.54■■■□□ 2.8
CCDC144AA2RUR9 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC32.54■■■□□ 2.8
CCDC144AA2RUR9 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
CCDC144AA2RUR9 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC32.53■■■□□ 2.8
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms