Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC189A1A4V9 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
CCDC189A1A4V9 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC189A1A4V9 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC189A1A4V9 ALDH1A3-203ENST00000557963 1670 ntBASIC22.4■■□□□ 1.18
CCDC189A1A4V9 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC189A1A4V9 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC22.4■■□□□ 1.18
CCDC189A1A4V9 AC004987.1-201ENST00000428627 508 ntBASIC22.4■■□□□ 1.18
CCDC189A1A4V9 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.4■■□□□ 1.18
CCDC189A1A4V9 AC120024.1-201ENST00000562672 995 ntBASIC22.4■■□□□ 1.18
CCDC189A1A4V9 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC22.4■■□□□ 1.18
CCDC189A1A4V9 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC189A1A4V9 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC189A1A4V9 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
CCDC189A1A4V9 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
CCDC189A1A4V9 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.39■■□□□ 1.18
CCDC189A1A4V9 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC22.39■■□□□ 1.18
CCDC189A1A4V9 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CCDC189A1A4V9 AL117328.2-201ENST00000624617 1940 ntBASIC22.39■■□□□ 1.18
CCDC189A1A4V9 TSPY13P-201ENST00000338964 914 ntBASIC22.39■■□□□ 1.17
CCDC189A1A4V9 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CCDC189A1A4V9 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.17
CCDC189A1A4V9 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.39■■□□□ 1.17
CCDC189A1A4V9 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.39■■□□□ 1.17
CCDC189A1A4V9 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
CCDC189A1A4V9 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
CCDC189A1A4V9 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CCDC189A1A4V9 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCDC189A1A4V9 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.38■■□□□ 1.17
CCDC189A1A4V9 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCDC189A1A4V9 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
CCDC189A1A4V9 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CCDC189A1A4V9 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCDC189A1A4V9 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC22.38■■□□□ 1.17
CCDC189A1A4V9 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCDC189A1A4V9 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CCDC189A1A4V9 BHLHE23-202ENST00000612929 1109 ntBASIC22.38■■□□□ 1.17
CCDC189A1A4V9 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCDC189A1A4V9 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
CCDC189A1A4V9 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC22.37■■□□□ 1.17
CCDC189A1A4V9 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
CCDC189A1A4V9 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC22.37■■□□□ 1.17
CCDC189A1A4V9 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CCDC189A1A4V9 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CCDC189A1A4V9 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
CCDC189A1A4V9 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
CCDC189A1A4V9 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CCDC189A1A4V9 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CCDC189A1A4V9 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
CCDC189A1A4V9 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
CCDC189A1A4V9 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
CCDC189A1A4V9 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
CCDC189A1A4V9 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.36■■□□□ 1.17
CCDC189A1A4V9 EI24-204ENST00000527235 1625 ntTSL 5 BASIC22.36■■□□□ 1.17
CCDC189A1A4V9 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
CCDC189A1A4V9 THA1P-201ENST00000590384 1145 ntBASIC22.36■■□□□ 1.17
CCDC189A1A4V9 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
CCDC189A1A4V9 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
CCDC189A1A4V9 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CCDC189A1A4V9 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CCDC189A1A4V9 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CCDC189A1A4V9 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.35■■□□□ 1.17
CCDC189A1A4V9 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
CCDC189A1A4V9 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CCDC189A1A4V9 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
CCDC189A1A4V9 ANOS2P-203ENST00000472227 1816 ntBASIC22.35■■□□□ 1.17
CCDC189A1A4V9 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.35■■□□□ 1.17
CCDC189A1A4V9 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
CCDC189A1A4V9 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
CCDC189A1A4V9 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CCDC189A1A4V9 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
CCDC189A1A4V9 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CCDC189A1A4V9 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CCDC189A1A4V9 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.34■■□□□ 1.17
CCDC189A1A4V9 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
CCDC189A1A4V9 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CCDC189A1A4V9 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CCDC189A1A4V9 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CCDC189A1A4V9 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CCDC189A1A4V9 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CCDC189A1A4V9 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CCDC189A1A4V9 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CCDC189A1A4V9 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CCDC189A1A4V9 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CCDC189A1A4V9 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
CCDC189A1A4V9 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC22.33■■□□□ 1.17
CCDC189A1A4V9 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.33■■□□□ 1.17
CCDC189A1A4V9 MIR4281-201ENST00000580852 62 ntBASIC22.33■■□□□ 1.17
CCDC189A1A4V9 MIR4508-201ENST00000584178 70 ntBASIC22.33■■□□□ 1.17
CCDC189A1A4V9 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC22.33■■□□□ 1.17
CCDC189A1A4V9 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC22.33■■□□□ 1.17
CCDC189A1A4V9 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CCDC189A1A4V9 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
CCDC189A1A4V9 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.16
CCDC189A1A4V9 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
CCDC189A1A4V9 AF131216.4-201ENST00000638924 1588 ntBASIC22.33■■□□□ 1.16
CCDC189A1A4V9 AF106564.1-201ENST00000607058 2553 ntBASIC22.33■■□□□ 1.16
CCDC189A1A4V9 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC22.33■■□□□ 1.16
CCDC189A1A4V9 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CCDC189A1A4V9 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms