Protein–RNA interactions for Protein: A0A1W2PRY6

SMIM27, Small integral membrane protein 27 (Fragment), humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM27A0A1W2PRY6 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMIM27A0A1W2PRY6 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC16.82■□□□□ 0.28
SMIM27A0A1W2PRY6 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMIM27A0A1W2PRY6 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SMIM27A0A1W2PRY6 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMIM27A0A1W2PRY6 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMIM27A0A1W2PRY6 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMIM27A0A1W2PRY6 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC16.81■□□□□ 0.28
SMIM27A0A1W2PRY6 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SMIM27A0A1W2PRY6 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC16.81■□□□□ 0.28
SMIM27A0A1W2PRY6 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
SMIM27A0A1W2PRY6 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMIM27A0A1W2PRY6 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMIM27A0A1W2PRY6 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC16.81■□□□□ 0.28
SMIM27A0A1W2PRY6 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC16.81■□□□□ 0.28
SMIM27A0A1W2PRY6 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC16.81■□□□□ 0.28
SMIM27A0A1W2PRY6 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SMIM27A0A1W2PRY6 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMIM27A0A1W2PRY6 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SMIM27A0A1W2PRY6 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMIM27A0A1W2PRY6 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC16.8■□□□□ 0.28
SMIM27A0A1W2PRY6 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMIM27A0A1W2PRY6 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SMIM27A0A1W2PRY6 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC16.8■□□□□ 0.28
SMIM27A0A1W2PRY6 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMIM27A0A1W2PRY6 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMIM27A0A1W2PRY6 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMIM27A0A1W2PRY6 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SMIM27A0A1W2PRY6 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMIM27A0A1W2PRY6 AC025884.2-201ENST00000553429 711 ntBASIC16.8■□□□□ 0.28
SMIM27A0A1W2PRY6 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SMIM27A0A1W2PRY6 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SMIM27A0A1W2PRY6 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SMIM27A0A1W2PRY6 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SMIM27A0A1W2PRY6 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SMIM27A0A1W2PRY6 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC16.79■□□□□ 0.28
SMIM27A0A1W2PRY6 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMIM27A0A1W2PRY6 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMIM27A0A1W2PRY6 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC16.79■□□□□ 0.28
SMIM27A0A1W2PRY6 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SMIM27A0A1W2PRY6 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC16.79■□□□□ 0.28
SMIM27A0A1W2PRY6 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMIM27A0A1W2PRY6 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMIM27A0A1W2PRY6 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMIM27A0A1W2PRY6 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMIM27A0A1W2PRY6 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMIM27A0A1W2PRY6 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC16.79■□□□□ 0.28
SMIM27A0A1W2PRY6 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMIM27A0A1W2PRY6 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMIM27A0A1W2PRY6 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC16.79■□□□□ 0.28
SMIM27A0A1W2PRY6 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMIM27A0A1W2PRY6 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SMIM27A0A1W2PRY6 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SMIM27A0A1W2PRY6 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SMIM27A0A1W2PRY6 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMIM27A0A1W2PRY6 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMIM27A0A1W2PRY6 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
SMIM27A0A1W2PRY6 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMIM27A0A1W2PRY6 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC16.79■□□□□ 0.28
SMIM27A0A1W2PRY6 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMIM27A0A1W2PRY6 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SMIM27A0A1W2PRY6 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMIM27A0A1W2PRY6 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SMIM27A0A1W2PRY6 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SMIM27A0A1W2PRY6 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC16.78■□□□□ 0.28
SMIM27A0A1W2PRY6 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SMIM27A0A1W2PRY6 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMIM27A0A1W2PRY6 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
SMIM27A0A1W2PRY6 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC16.78■□□□□ 0.28
SMIM27A0A1W2PRY6 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMIM27A0A1W2PRY6 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMIM27A0A1W2PRY6 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMIM27A0A1W2PRY6 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMIM27A0A1W2PRY6 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC16.78■□□□□ 0.28
SMIM27A0A1W2PRY6 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMIM27A0A1W2PRY6 AC079630.1-202ENST00000618127 1840 ntBASIC16.77■□□□□ 0.28
SMIM27A0A1W2PRY6 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC16.77■□□□□ 0.28
SMIM27A0A1W2PRY6 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMIM27A0A1W2PRY6 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SMIM27A0A1W2PRY6 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
SMIM27A0A1W2PRY6 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
SMIM27A0A1W2PRY6 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMIM27A0A1W2PRY6 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SMIM27A0A1W2PRY6 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMIM27A0A1W2PRY6 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SMIM27A0A1W2PRY6 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
SMIM27A0A1W2PRY6 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMIM27A0A1W2PRY6 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC16.77■□□□□ 0.28
SMIM27A0A1W2PRY6 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMIM27A0A1W2PRY6 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SMIM27A0A1W2PRY6 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC16.77■□□□□ 0.27
SMIM27A0A1W2PRY6 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SMIM27A0A1W2PRY6 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SMIM27A0A1W2PRY6 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
SMIM27A0A1W2PRY6 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SMIM27A0A1W2PRY6 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SMIM27A0A1W2PRY6 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
SMIM27A0A1W2PRY6 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SMIM27A0A1W2PRY6 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
SMIM27A0A1W2PRY6 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms