Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IGHV4-28A0A0C4DH34 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
IGHV4-28A0A0C4DH34 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
IGHV4-28A0A0C4DH34 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
IGHV4-28A0A0C4DH34 AC004812.2-201ENST00000611079 2094 ntBASIC16.22■□□□□ 0.19
IGHV4-28A0A0C4DH34 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
IGHV4-28A0A0C4DH34 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IGHV4-28A0A0C4DH34 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
IGHV4-28A0A0C4DH34 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
IGHV4-28A0A0C4DH34 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IGHV4-28A0A0C4DH34 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
IGHV4-28A0A0C4DH34 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC16.22■□□□□ 0.19
IGHV4-28A0A0C4DH34 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC16.22■□□□□ 0.19
IGHV4-28A0A0C4DH34 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IGHV4-28A0A0C4DH34 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC16.22■□□□□ 0.19
IGHV4-28A0A0C4DH34 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
IGHV4-28A0A0C4DH34 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
IGHV4-28A0A0C4DH34 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
IGHV4-28A0A0C4DH34 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IGHV4-28A0A0C4DH34 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IGHV4-28A0A0C4DH34 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC16.21■□□□□ 0.19
IGHV4-28A0A0C4DH34 AC135279.3-201ENST00000610945 1311 ntBASIC16.21■□□□□ 0.19
IGHV4-28A0A0C4DH34 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
IGHV4-28A0A0C4DH34 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IGHV4-28A0A0C4DH34 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
IGHV4-28A0A0C4DH34 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
IGHV4-28A0A0C4DH34 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
IGHV4-28A0A0C4DH34 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IGHV4-28A0A0C4DH34 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IGHV4-28A0A0C4DH34 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC16.21■□□□□ 0.19
IGHV4-28A0A0C4DH34 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
IGHV4-28A0A0C4DH34 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC16.21■□□□□ 0.19
IGHV4-28A0A0C4DH34 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
IGHV4-28A0A0C4DH34 AC106739.1-201ENST00000617035 715 ntBASIC16.21■□□□□ 0.19
IGHV4-28A0A0C4DH34 AC009086.3-201ENST00000623486 1008 ntBASIC16.21■□□□□ 0.19
IGHV4-28A0A0C4DH34 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
IGHV4-28A0A0C4DH34 PREB-202ENST00000406567 1910 ntTSL 5 BASIC16.21■□□□□ 0.19
IGHV4-28A0A0C4DH34 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
IGHV4-28A0A0C4DH34 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
IGHV4-28A0A0C4DH34 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
IGHV4-28A0A0C4DH34 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
IGHV4-28A0A0C4DH34 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
IGHV4-28A0A0C4DH34 PTCHD3P2-201ENST00000424937 1205 ntBASIC16.2■□□□□ 0.18
IGHV4-28A0A0C4DH34 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC16.2■□□□□ 0.18
IGHV4-28A0A0C4DH34 AC024257.2-201ENST00000549699 147 ntBASIC16.2■□□□□ 0.18
IGHV4-28A0A0C4DH34 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC16.2■□□□□ 0.18
IGHV4-28A0A0C4DH34 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
IGHV4-28A0A0C4DH34 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
IGHV4-28A0A0C4DH34 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
IGHV4-28A0A0C4DH34 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
IGHV4-28A0A0C4DH34 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
IGHV4-28A0A0C4DH34 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
IGHV4-28A0A0C4DH34 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
IGHV4-28A0A0C4DH34 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
IGHV4-28A0A0C4DH34 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IGHV4-28A0A0C4DH34 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
IGHV4-28A0A0C4DH34 VGF-203ENST00000611537 1622 ntTSL 5 BASIC16.19■□□□□ 0.18
IGHV4-28A0A0C4DH34 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IGHV4-28A0A0C4DH34 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
IGHV4-28A0A0C4DH34 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IGHV4-28A0A0C4DH34 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
IGHV4-28A0A0C4DH34 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
IGHV4-28A0A0C4DH34 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC16.19■□□□□ 0.18
IGHV4-28A0A0C4DH34 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IGHV4-28A0A0C4DH34 SERBP1P1-201ENST00000396021 1160 ntBASIC16.19■□□□□ 0.18
IGHV4-28A0A0C4DH34 AC006455.2-201ENST00000429931 906 ntBASIC16.19■□□□□ 0.18
IGHV4-28A0A0C4DH34 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IGHV4-28A0A0C4DH34 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC16.19■□□□□ 0.18
IGHV4-28A0A0C4DH34 SF1-220ENST00000626028 704 ntTSL 2 BASIC16.19■□□□□ 0.18
IGHV4-28A0A0C4DH34 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IGHV4-28A0A0C4DH34 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
IGHV4-28A0A0C4DH34 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IGHV4-28A0A0C4DH34 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
IGHV4-28A0A0C4DH34 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
IGHV4-28A0A0C4DH34 ABCB10P4-201ENST00000566803 2184 ntBASIC16.19■□□□□ 0.18
IGHV4-28A0A0C4DH34 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IGHV4-28A0A0C4DH34 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC16.18■□□□□ 0.18
IGHV4-28A0A0C4DH34 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IGHV4-28A0A0C4DH34 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IGHV4-28A0A0C4DH34 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
IGHV4-28A0A0C4DH34 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
IGHV4-28A0A0C4DH34 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC16.18■□□□□ 0.18
IGHV4-28A0A0C4DH34 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC16.18■□□□□ 0.18
IGHV4-28A0A0C4DH34 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC16.18■□□□□ 0.18
IGHV4-28A0A0C4DH34 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC16.18■□□□□ 0.18
IGHV4-28A0A0C4DH34 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC16.18■□□□□ 0.18
IGHV4-28A0A0C4DH34 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
IGHV4-28A0A0C4DH34 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IGHV4-28A0A0C4DH34 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IGHV4-28A0A0C4DH34 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
IGHV4-28A0A0C4DH34 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC16.17■□□□□ 0.18
IGHV4-28A0A0C4DH34 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC16.17■□□□□ 0.18
IGHV4-28A0A0C4DH34 AC133561.4-201ENST00000566112 224 ntBASIC16.17■□□□□ 0.18
IGHV4-28A0A0C4DH34 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC16.17■□□□□ 0.18
IGHV4-28A0A0C4DH34 AC005837.3-201ENST00000612163 286 ntBASIC16.17■□□□□ 0.18
IGHV4-28A0A0C4DH34 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
IGHV4-28A0A0C4DH34 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
IGHV4-28A0A0C4DH34 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IGHV4-28A0A0C4DH34 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC16.17■□□□□ 0.18
IGHV4-28A0A0C4DH34 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms