Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.97■□□□□ 0.63
TRAV20A0A0B4J274 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV20A0A0B4J274 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV20A0A0B4J274 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.97■□□□□ 0.63
TRAV20A0A0B4J274 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV20A0A0B4J274 UNC93B3-201ENST00000308076 687 ntBASIC18.97■□□□□ 0.63
TRAV20A0A0B4J274 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV20A0A0B4J274 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
TRAV20A0A0B4J274 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV20A0A0B4J274 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.97■□□□□ 0.63
TRAV20A0A0B4J274 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV20A0A0B4J274 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV20A0A0B4J274 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV20A0A0B4J274 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV20A0A0B4J274 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV20A0A0B4J274 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.96■□□□□ 0.63
TRAV20A0A0B4J274 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.96■□□□□ 0.63
TRAV20A0A0B4J274 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
TRAV20A0A0B4J274 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV20A0A0B4J274 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV20A0A0B4J274 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TRAV20A0A0B4J274 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV20A0A0B4J274 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.96■□□□□ 0.63
TRAV20A0A0B4J274 DUX4L19-201ENST00000557448 1267 ntBASIC18.96■□□□□ 0.63
TRAV20A0A0B4J274 AL136162.1-201ENST00000607711 1078 ntBASIC18.96■□□□□ 0.63
TRAV20A0A0B4J274 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV20A0A0B4J274 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV20A0A0B4J274 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
TRAV20A0A0B4J274 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV20A0A0B4J274 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV20A0A0B4J274 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.95■□□□□ 0.62
TRAV20A0A0B4J274 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV20A0A0B4J274 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.95■□□□□ 0.62
TRAV20A0A0B4J274 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV20A0A0B4J274 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV20A0A0B4J274 AC142381.2-201ENST00000566120 298 ntBASIC18.95■□□□□ 0.62
TRAV20A0A0B4J274 AC092171.4-201ENST00000609130 632 ntBASIC18.95■□□□□ 0.62
TRAV20A0A0B4J274 MIR6089-201ENST00000616698 64 ntBASIC18.95■□□□□ 0.62
TRAV20A0A0B4J274 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
TRAV20A0A0B4J274 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV20A0A0B4J274 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV20A0A0B4J274 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV20A0A0B4J274 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV20A0A0B4J274 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
TRAV20A0A0B4J274 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV20A0A0B4J274 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TRAV20A0A0B4J274 AC135279.3-201ENST00000610945 1311 ntBASIC18.94■□□□□ 0.62
TRAV20A0A0B4J274 DUSP8P4-201ENST00000399538 1761 ntBASIC18.93■□□□□ 0.62
TRAV20A0A0B4J274 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV20A0A0B4J274 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV20A0A0B4J274 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV20A0A0B4J274 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.93■□□□□ 0.62
TRAV20A0A0B4J274 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.93■□□□□ 0.62
TRAV20A0A0B4J274 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.93■□□□□ 0.62
TRAV20A0A0B4J274 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV20A0A0B4J274 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV20A0A0B4J274 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV20A0A0B4J274 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV20A0A0B4J274 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TRAV20A0A0B4J274 AL022069.1-201ENST00000568025 1636 ntBASIC18.92■□□□□ 0.62
TRAV20A0A0B4J274 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV20A0A0B4J274 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV20A0A0B4J274 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.92■□□□□ 0.62
TRAV20A0A0B4J274 AC131274.2-201ENST00000580697 1507 ntBASIC18.92■□□□□ 0.62
TRAV20A0A0B4J274 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV20A0A0B4J274 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV20A0A0B4J274 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.92■□□□□ 0.62
TRAV20A0A0B4J274 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.92■□□□□ 0.62
TRAV20A0A0B4J274 SLC6A10P-202ENST00000431994 2058 ntBASIC18.92■□□□□ 0.62
TRAV20A0A0B4J274 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV20A0A0B4J274 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV20A0A0B4J274 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV20A0A0B4J274 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
TRAV20A0A0B4J274 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV20A0A0B4J274 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC18.91■□□□□ 0.62
TRAV20A0A0B4J274 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV20A0A0B4J274 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV20A0A0B4J274 EDA-201ENST00000338901 1233 ntBASIC18.91■□□□□ 0.62
TRAV20A0A0B4J274 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.91■□□□□ 0.62
TRAV20A0A0B4J274 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.91■□□□□ 0.62
TRAV20A0A0B4J274 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.91■□□□□ 0.62
TRAV20A0A0B4J274 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV20A0A0B4J274 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.91■□□□□ 0.62
TRAV20A0A0B4J274 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV20A0A0B4J274 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV20A0A0B4J274 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV20A0A0B4J274 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
TRAV20A0A0B4J274 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV20A0A0B4J274 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV20A0A0B4J274 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV20A0A0B4J274 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV20A0A0B4J274 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV20A0A0B4J274 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV20A0A0B4J274 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.9■□□□□ 0.62
TRAV20A0A0B4J274 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.9■□□□□ 0.62
TRAV20A0A0B4J274 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.9■□□□□ 0.62
TRAV20A0A0B4J274 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV20A0A0B4J274 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV20A0A0B4J274 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV20A0A0B4J274 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms