Protein–RNA interactions for Protein: A0A0B4J1X8

IGHV3-43, Immunoglobulin heavy variable 3-43, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43A0A0B4J1X8 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.63■□□□□ 0.57
IGHV3-43A0A0B4J1X8 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.63■□□□□ 0.57
IGHV3-43A0A0B4J1X8 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
IGHV3-43A0A0B4J1X8 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
IGHV3-43A0A0B4J1X8 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
IGHV3-43A0A0B4J1X8 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.62■□□□□ 0.57
IGHV3-43A0A0B4J1X8 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
IGHV3-43A0A0B4J1X8 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
IGHV3-43A0A0B4J1X8 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
IGHV3-43A0A0B4J1X8 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.62■□□□□ 0.57
IGHV3-43A0A0B4J1X8 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.62■□□□□ 0.57
IGHV3-43A0A0B4J1X8 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.62■□□□□ 0.57
IGHV3-43A0A0B4J1X8 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
IGHV3-43A0A0B4J1X8 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
IGHV3-43A0A0B4J1X8 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.62■□□□□ 0.57
IGHV3-43A0A0B4J1X8 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.62■□□□□ 0.57
IGHV3-43A0A0B4J1X8 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.62■□□□□ 0.57
IGHV3-43A0A0B4J1X8 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.62■□□□□ 0.57
IGHV3-43A0A0B4J1X8 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
IGHV3-43A0A0B4J1X8 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
IGHV3-43A0A0B4J1X8 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
IGHV3-43A0A0B4J1X8 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
IGHV3-43A0A0B4J1X8 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
IGHV3-43A0A0B4J1X8 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.61■□□□□ 0.57
IGHV3-43A0A0B4J1X8 AC012676.1-201ENST00000574705 1949 ntBASIC18.61■□□□□ 0.57
IGHV3-43A0A0B4J1X8 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
IGHV3-43A0A0B4J1X8 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
IGHV3-43A0A0B4J1X8 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
IGHV3-43A0A0B4J1X8 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IGHV3-43A0A0B4J1X8 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IGHV3-43A0A0B4J1X8 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
IGHV3-43A0A0B4J1X8 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IGHV3-43A0A0B4J1X8 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.61■□□□□ 0.57
IGHV3-43A0A0B4J1X8 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.61■□□□□ 0.57
IGHV3-43A0A0B4J1X8 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.61■□□□□ 0.57
IGHV3-43A0A0B4J1X8 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IGHV3-43A0A0B4J1X8 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
IGHV3-43A0A0B4J1X8 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
IGHV3-43A0A0B4J1X8 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
IGHV3-43A0A0B4J1X8 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
IGHV3-43A0A0B4J1X8 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IGHV3-43A0A0B4J1X8 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IGHV3-43A0A0B4J1X8 DUSP8P3-201ENST00000399571 1760 ntBASIC18.6■□□□□ 0.57
IGHV3-43A0A0B4J1X8 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
IGHV3-43A0A0B4J1X8 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
IGHV3-43A0A0B4J1X8 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
IGHV3-43A0A0B4J1X8 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
IGHV3-43A0A0B4J1X8 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.6■□□□□ 0.57
IGHV3-43A0A0B4J1X8 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.6■□□□□ 0.57
IGHV3-43A0A0B4J1X8 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
IGHV3-43A0A0B4J1X8 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
IGHV3-43A0A0B4J1X8 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
IGHV3-43A0A0B4J1X8 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
IGHV3-43A0A0B4J1X8 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.6■□□□□ 0.57
IGHV3-43A0A0B4J1X8 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.6■□□□□ 0.57
IGHV3-43A0A0B4J1X8 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
IGHV3-43A0A0B4J1X8 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.6■□□□□ 0.57
IGHV3-43A0A0B4J1X8 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
IGHV3-43A0A0B4J1X8 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
IGHV3-43A0A0B4J1X8 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
IGHV3-43A0A0B4J1X8 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
IGHV3-43A0A0B4J1X8 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
IGHV3-43A0A0B4J1X8 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.6■□□□□ 0.57
IGHV3-43A0A0B4J1X8 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
IGHV3-43A0A0B4J1X8 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC18.59■□□□□ 0.57
IGHV3-43A0A0B4J1X8 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
IGHV3-43A0A0B4J1X8 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
IGHV3-43A0A0B4J1X8 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
IGHV3-43A0A0B4J1X8 AC079630.1-202ENST00000618127 1840 ntBASIC18.59■□□□□ 0.57
IGHV3-43A0A0B4J1X8 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.59■□□□□ 0.57
IGHV3-43A0A0B4J1X8 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
IGHV3-43A0A0B4J1X8 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
IGHV3-43A0A0B4J1X8 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.59■□□□□ 0.57
IGHV3-43A0A0B4J1X8 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
IGHV3-43A0A0B4J1X8 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
IGHV3-43A0A0B4J1X8 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
IGHV3-43A0A0B4J1X8 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.58■□□□□ 0.57
IGHV3-43A0A0B4J1X8 AC021242.3-201ENST00000607598 1377 ntBASIC18.58■□□□□ 0.57
IGHV3-43A0A0B4J1X8 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
IGHV3-43A0A0B4J1X8 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
IGHV3-43A0A0B4J1X8 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.56
IGHV3-43A0A0B4J1X8 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.58■□□□□ 0.56
IGHV3-43A0A0B4J1X8 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.58■□□□□ 0.56
IGHV3-43A0A0B4J1X8 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
IGHV3-43A0A0B4J1X8 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
IGHV3-43A0A0B4J1X8 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
IGHV3-43A0A0B4J1X8 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
IGHV3-43A0A0B4J1X8 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
IGHV3-43A0A0B4J1X8 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
IGHV3-43A0A0B4J1X8 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
IGHV3-43A0A0B4J1X8 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
IGHV3-43A0A0B4J1X8 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
IGHV3-43A0A0B4J1X8 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
IGHV3-43A0A0B4J1X8 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
IGHV3-43A0A0B4J1X8 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
IGHV3-43A0A0B4J1X8 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
IGHV3-43A0A0B4J1X8 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
IGHV3-43A0A0B4J1X8 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
IGHV3-43A0A0B4J1X8 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
IGHV3-43A0A0B4J1X8 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms