Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV8-1A0A0A6YYK1 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAV8-1A0A0A6YYK1 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV8-1A0A0A6YYK1 SPCS2P3-201ENST00000500401 656 ntBASIC17.06■□□□□ 0.32
TRAV8-1A0A0A6YYK1 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC17.06■□□□□ 0.32
TRAV8-1A0A0A6YYK1 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV8-1A0A0A6YYK1 AC127496.7-201ENST00000625110 1798 ntBASIC17.06■□□□□ 0.32
TRAV8-1A0A0A6YYK1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TRAV8-1A0A0A6YYK1 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV8-1A0A0A6YYK1 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV8-1A0A0A6YYK1 EI24-204ENST00000527235 1625 ntTSL 5 BASIC17.06■□□□□ 0.32
TRAV8-1A0A0A6YYK1 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV8-1A0A0A6YYK1 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAV8-1A0A0A6YYK1 AC007375.3-201ENST00000600936 2314 ntBASIC17.05■□□□□ 0.32
TRAV8-1A0A0A6YYK1 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAV8-1A0A0A6YYK1 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAV8-1A0A0A6YYK1 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV8-1A0A0A6YYK1 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV8-1A0A0A6YYK1 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.05■□□□□ 0.32
TRAV8-1A0A0A6YYK1 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TRAV8-1A0A0A6YYK1 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TRAV8-1A0A0A6YYK1 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV8-1A0A0A6YYK1 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV8-1A0A0A6YYK1 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TRAV8-1A0A0A6YYK1 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV8-1A0A0A6YYK1 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV8-1A0A0A6YYK1 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV8-1A0A0A6YYK1 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TRAV8-1A0A0A6YYK1 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.05■□□□□ 0.32
TRAV8-1A0A0A6YYK1 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV8-1A0A0A6YYK1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.05■□□□□ 0.32
TRAV8-1A0A0A6YYK1 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV8-1A0A0A6YYK1 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAV8-1A0A0A6YYK1 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV8-1A0A0A6YYK1 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV8-1A0A0A6YYK1 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV8-1A0A0A6YYK1 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV8-1A0A0A6YYK1 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV8-1A0A0A6YYK1 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV8-1A0A0A6YYK1 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC17.04■□□□□ 0.32
TRAV8-1A0A0A6YYK1 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC17.04■□□□□ 0.32
TRAV8-1A0A0A6YYK1 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TRAV8-1A0A0A6YYK1 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TRAV8-1A0A0A6YYK1 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
TRAV8-1A0A0A6YYK1 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV8-1A0A0A6YYK1 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV8-1A0A0A6YYK1 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV8-1A0A0A6YYK1 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV8-1A0A0A6YYK1 ALDH1A3-203ENST00000557963 1670 ntBASIC17.04■□□□□ 0.32
TRAV8-1A0A0A6YYK1 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TRAV8-1A0A0A6YYK1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.03■□□□□ 0.32
TRAV8-1A0A0A6YYK1 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV8-1A0A0A6YYK1 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
TRAV8-1A0A0A6YYK1 AC087393.1-201ENST00000582896 145 ntBASIC17.03■□□□□ 0.32
TRAV8-1A0A0A6YYK1 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TRAV8-1A0A0A6YYK1 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC17.03■□□□□ 0.32
TRAV8-1A0A0A6YYK1 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV8-1A0A0A6YYK1 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.03■□□□□ 0.32
TRAV8-1A0A0A6YYK1 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV8-1A0A0A6YYK1 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
TRAV8-1A0A0A6YYK1 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV8-1A0A0A6YYK1 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
TRAV8-1A0A0A6YYK1 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TRAV8-1A0A0A6YYK1 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV8-1A0A0A6YYK1 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV8-1A0A0A6YYK1 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV8-1A0A0A6YYK1 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV8-1A0A0A6YYK1 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TRAV8-1A0A0A6YYK1 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.02■□□□□ 0.32
TRAV8-1A0A0A6YYK1 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.02■□□□□ 0.32
TRAV8-1A0A0A6YYK1 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
TRAV8-1A0A0A6YYK1 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC17.02■□□□□ 0.32
TRAV8-1A0A0A6YYK1 AL592293.1-201ENST00000502889 1188 ntBASIC17.02■□□□□ 0.32
TRAV8-1A0A0A6YYK1 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TRAV8-1A0A0A6YYK1 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV8-1A0A0A6YYK1 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV8-1A0A0A6YYK1 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV8-1A0A0A6YYK1 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV8-1A0A0A6YYK1 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV8-1A0A0A6YYK1 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV8-1A0A0A6YYK1 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV8-1A0A0A6YYK1 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV8-1A0A0A6YYK1 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV8-1A0A0A6YYK1 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.01■□□□□ 0.31
TRAV8-1A0A0A6YYK1 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
TRAV8-1A0A0A6YYK1 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV8-1A0A0A6YYK1 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV8-1A0A0A6YYK1 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV8-1A0A0A6YYK1 AC137767.1-201ENST00000602918 1920 ntBASIC17.01■□□□□ 0.31
TRAV8-1A0A0A6YYK1 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.01■□□□□ 0.31
TRAV8-1A0A0A6YYK1 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV8-1A0A0A6YYK1 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.01■□□□□ 0.31
TRAV8-1A0A0A6YYK1 AC131274.2-201ENST00000580697 1507 ntBASIC17.01■□□□□ 0.31
TRAV8-1A0A0A6YYK1 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TRAV8-1A0A0A6YYK1 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
TRAV8-1A0A0A6YYK1 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC17■□□□□ 0.31
TRAV8-1A0A0A6YYK1 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV8-1A0A0A6YYK1 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV8-1A0A0A6YYK1 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV8-1A0A0A6YYK1 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms