Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 AC023794.5-201ENST00000564380 2157 ntBASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 LAP3P2-201ENST00000454686 1454 ntBASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 AC144522.1-201ENST00000625111 1658 ntBASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 MIR663B-201ENST00000408361 115 ntBASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 CROT-203ENST00000419147 2959 ntTSL 2 BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 ST13P19-201ENST00000442505 1124 ntBASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 AC006122.1-201ENST00000493323 440 ntBASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 AL583810.1-201ENST00000553344 1045 ntBASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 DERL2-202ENST00000570848 657 ntTSL 5 BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 NAA38-206ENST00000576384 424 ntTSL 2 BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 KLK3-207ENST00000595952 969 ntTSL 3 BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 TECR-220ENST00000600083 1204 ntTSL 2 BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 AL359881.2-201ENST00000602973 570 ntBASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 AP000346.4-201ENST00000614827 381 ntBASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 PCDHA5-203ENST00000614258 4248 ntBASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
HLA-DRB4X5D2U9 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
HLA-DRB4X5D2U9 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms