Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
BIVM-ERCC5R4GMW8 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC22.53■■□□□ 1.2
BIVM-ERCC5R4GMW8 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
BIVM-ERCC5R4GMW8 RPS7-202ENST00000403564 764 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
BIVM-ERCC5R4GMW8 AC024028.1-201ENST00000437145 437 ntTSL 3 BASIC22.53■■□□□ 1.2
BIVM-ERCC5R4GMW8 AL356000.1-201ENST00000441073 1238 ntBASIC22.53■■□□□ 1.2
BIVM-ERCC5R4GMW8 DMKN-244ENST00000480502 820 ntAPPRIS ALT2 TSL 3 BASIC22.53■■□□□ 1.2
BIVM-ERCC5R4GMW8 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC22.53■■□□□ 1.2
BIVM-ERCC5R4GMW8 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC22.53■■□□□ 1.2
BIVM-ERCC5R4GMW8 SLC25A51P3-201ENST00000521814 889 ntBASIC22.53■■□□□ 1.2
BIVM-ERCC5R4GMW8 C3orf84-203ENST00000545770 706 ntAPPRIS P2 TSL 5 BASIC22.53■■□□□ 1.2
BIVM-ERCC5R4GMW8 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC22.53■■□□□ 1.2
BIVM-ERCC5R4GMW8 AC007292.1-201ENST00000594444 746 ntTSL 2 BASIC22.53■■□□□ 1.2
BIVM-ERCC5R4GMW8 AC136475.7-201ENST00000602949 592 ntBASIC22.53■■□□□ 1.2
BIVM-ERCC5R4GMW8 AC009812.1-201ENST00000605948 1059 ntBASIC22.53■■□□□ 1.2
BIVM-ERCC5R4GMW8 TRPC5OS-203ENST00000635763 955 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
BIVM-ERCC5R4GMW8 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
BIVM-ERCC5R4GMW8 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC22.53■■□□□ 1.2
BIVM-ERCC5R4GMW8 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
BIVM-ERCC5R4GMW8 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
BIVM-ERCC5R4GMW8 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC22.52■■□□□ 1.2
BIVM-ERCC5R4GMW8 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
BIVM-ERCC5R4GMW8 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
BIVM-ERCC5R4GMW8 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
BIVM-ERCC5R4GMW8 AC135506.1-201ENST00000603877 1799 ntBASIC22.52■■□□□ 1.2
BIVM-ERCC5R4GMW8 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
BIVM-ERCC5R4GMW8 CDK7-201ENST00000256443 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
BIVM-ERCC5R4GMW8 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC22.52■■□□□ 1.2
BIVM-ERCC5R4GMW8 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
BIVM-ERCC5R4GMW8 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC22.52■■□□□ 1.2
BIVM-ERCC5R4GMW8 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
BIVM-ERCC5R4GMW8 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
BIVM-ERCC5R4GMW8 KRTAP10-11-201ENST00000334670 1237 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
BIVM-ERCC5R4GMW8 AL358876.2-201ENST00000424689 477 ntTSL 3 BASIC22.52■■□□□ 1.2
BIVM-ERCC5R4GMW8 CRIP1P2-201ENST00000425396 228 ntBASIC22.52■■□□□ 1.2
BIVM-ERCC5R4GMW8 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
BIVM-ERCC5R4GMW8 SRP9P1-201ENST00000445874 261 ntBASIC22.52■■□□□ 1.2
BIVM-ERCC5R4GMW8 PEBP1P3-201ENST00000455475 548 ntBASIC22.52■■□□□ 1.2
BIVM-ERCC5R4GMW8 AC092656.1-202ENST00000515843 998 ntTSL 4 BASIC22.52■■□□□ 1.2
BIVM-ERCC5R4GMW8 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC22.52■■□□□ 1.2
BIVM-ERCC5R4GMW8 AC079336.3-201ENST00000577227 475 ntTSL 3 BASIC22.52■■□□□ 1.2
BIVM-ERCC5R4GMW8 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC22.52■■□□□ 1.2
BIVM-ERCC5R4GMW8 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
BIVM-ERCC5R4GMW8 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
BIVM-ERCC5R4GMW8 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC22.52■■□□□ 1.2
BIVM-ERCC5R4GMW8 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
BIVM-ERCC5R4GMW8 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
BIVM-ERCC5R4GMW8 MYB-201ENST00000316528 3571 ntTSL 5 BASIC22.51■■□□□ 1.19
BIVM-ERCC5R4GMW8 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC22.51■■□□□ 1.19
BIVM-ERCC5R4GMW8 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
BIVM-ERCC5R4GMW8 SERPING1-202ENST00000340687 1719 ntTSL 5 BASIC22.51■■□□□ 1.19
BIVM-ERCC5R4GMW8 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC22.51■■□□□ 1.19
BIVM-ERCC5R4GMW8 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC22.51■■□□□ 1.19
BIVM-ERCC5R4GMW8 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC22.51■■□□□ 1.19
BIVM-ERCC5R4GMW8 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
BIVM-ERCC5R4GMW8 SNORA30.1-201ENST00000363193 129 ntBASIC22.51■■□□□ 1.19
BIVM-ERCC5R4GMW8 ASPDH-201ENST00000376916 848 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
BIVM-ERCC5R4GMW8 AP000346.2-202ENST00000425948 383 ntBASIC22.51■■□□□ 1.19
BIVM-ERCC5R4GMW8 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC22.51■■□□□ 1.19
BIVM-ERCC5R4GMW8 AC104115.1-201ENST00000484005 623 ntBASIC22.51■■□□□ 1.19
BIVM-ERCC5R4GMW8 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC22.51■■□□□ 1.19
BIVM-ERCC5R4GMW8 CSRP2-207ENST00000552330 910 ntTSL 3 BASIC22.51■■□□□ 1.19
BIVM-ERCC5R4GMW8 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
BIVM-ERCC5R4GMW8 LINC02328-202ENST00000554647 522 ntTSL 4 BASIC22.51■■□□□ 1.19
BIVM-ERCC5R4GMW8 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC22.51■■□□□ 1.19
BIVM-ERCC5R4GMW8 MSRB1-205ENST00000564908 550 ntTSL 3 BASIC22.51■■□□□ 1.19
BIVM-ERCC5R4GMW8 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC22.51■■□□□ 1.19
BIVM-ERCC5R4GMW8 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
BIVM-ERCC5R4GMW8 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC22.51■■□□□ 1.19
BIVM-ERCC5R4GMW8 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC22.51■■□□□ 1.19
BIVM-ERCC5R4GMW8 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC22.51■■□□□ 1.19
BIVM-ERCC5R4GMW8 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
BIVM-ERCC5R4GMW8 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
BIVM-ERCC5R4GMW8 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
BIVM-ERCC5R4GMW8 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC22.51■■□□□ 1.19
BIVM-ERCC5R4GMW8 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
BIVM-ERCC5R4GMW8 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
BIVM-ERCC5R4GMW8 TBC1D3P1-201ENST00000590047 1693 ntBASIC22.5■■□□□ 1.19
BIVM-ERCC5R4GMW8 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
BIVM-ERCC5R4GMW8 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC22.5■■□□□ 1.19
BIVM-ERCC5R4GMW8 ASS1P1-201ENST00000402854 1237 ntBASIC22.5■■□□□ 1.19
BIVM-ERCC5R4GMW8 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
BIVM-ERCC5R4GMW8 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC22.5■■□□□ 1.19
BIVM-ERCC5R4GMW8 AC022447.5-201ENST00000504817 392 ntBASIC22.5■■□□□ 1.19
BIVM-ERCC5R4GMW8 AC127496.3-201ENST00000576032 494 ntTSL 3 BASIC22.5■■□□□ 1.19
BIVM-ERCC5R4GMW8 RN7SL478P-201ENST00000584358 298 ntBASIC22.5■■□□□ 1.19
BIVM-ERCC5R4GMW8 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
BIVM-ERCC5R4GMW8 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
BIVM-ERCC5R4GMW8 GSN-203ENST00000373808 2664 ntTSL 2 BASIC22.5■■□□□ 1.19
BIVM-ERCC5R4GMW8 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
BIVM-ERCC5R4GMW8 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
BIVM-ERCC5R4GMW8 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
BIVM-ERCC5R4GMW8 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
BIVM-ERCC5R4GMW8 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
BIVM-ERCC5R4GMW8 CDCA7L-201ENST00000356195 2915 ntTSL 2 BASIC22.5■■□□□ 1.19
BIVM-ERCC5R4GMW8 GLT6D1-201ENST00000371763 1526 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
BIVM-ERCC5R4GMW8 SUCLG2-203ENST00000492795 1512 ntTSL 2 BASIC22.5■■□□□ 1.19
BIVM-ERCC5R4GMW8 GLT6D1-202ENST00000613244 1523 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
BIVM-ERCC5R4GMW8 Z97653.2-201ENST00000623057 1418 ntBASIC22.5■■□□□ 1.19
BIVM-ERCC5R4GMW8 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms