Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.99□□□□□ -0.17
SATB2Q9UPW6 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SATB2Q9UPW6 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.99□□□□□ -0.17
SATB2Q9UPW6 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SATB2Q9UPW6 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SATB2Q9UPW6 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC13.98□□□□□ -0.17
SATB2Q9UPW6 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SATB2Q9UPW6 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
SATB2Q9UPW6 AC018629.1-201ENST00000623381 1736 ntBASIC13.98□□□□□ -0.17
SATB2Q9UPW6 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SATB2Q9UPW6 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SATB2Q9UPW6 STRCP1-201ENST00000509801 5328 ntBASIC13.98□□□□□ -0.17
SATB2Q9UPW6 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC13.98□□□□□ -0.17
SATB2Q9UPW6 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SATB2Q9UPW6 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SATB2Q9UPW6 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SATB2Q9UPW6 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.98□□□□□ -0.17
SATB2Q9UPW6 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
SATB2Q9UPW6 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC13.98□□□□□ -0.17
SATB2Q9UPW6 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SATB2Q9UPW6 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SATB2Q9UPW6 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
SATB2Q9UPW6 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.98□□□□□ -0.17
SATB2Q9UPW6 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SATB2Q9UPW6 Z69890.1-201ENST00000382990 339 ntBASIC13.98□□□□□ -0.17
SATB2Q9UPW6 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC13.98□□□□□ -0.17
SATB2Q9UPW6 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC13.98□□□□□ -0.17
SATB2Q9UPW6 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC13.98□□□□□ -0.17
SATB2Q9UPW6 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC13.98□□□□□ -0.17
SATB2Q9UPW6 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SATB2Q9UPW6 GCOM2-201ENST00000509133 1104 ntBASIC13.98□□□□□ -0.17
SATB2Q9UPW6 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
SATB2Q9UPW6 MIR4522-201ENST00000584932 87 ntBASIC13.98□□□□□ -0.17
SATB2Q9UPW6 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
SATB2Q9UPW6 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.98□□□□□ -0.17
SATB2Q9UPW6 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SATB2Q9UPW6 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SATB2Q9UPW6 Z82170.1-201ENST00000625081 3192 ntBASIC13.98□□□□□ -0.17
SATB2Q9UPW6 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.98□□□□□ -0.17
SATB2Q9UPW6 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SATB2Q9UPW6 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SATB2Q9UPW6 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC13.98□□□□□ -0.17
SATB2Q9UPW6 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.98□□□□□ -0.17
SATB2Q9UPW6 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
SATB2Q9UPW6 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SATB2Q9UPW6 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SATB2Q9UPW6 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SATB2Q9UPW6 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SATB2Q9UPW6 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.98□□□□□ -0.17
SATB2Q9UPW6 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SATB2Q9UPW6 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SATB2Q9UPW6 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SATB2Q9UPW6 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SATB2Q9UPW6 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SATB2Q9UPW6 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SATB2Q9UPW6 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SATB2Q9UPW6 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SATB2Q9UPW6 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SATB2Q9UPW6 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SATB2Q9UPW6 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC13.97□□□□□ -0.17
SATB2Q9UPW6 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SATB2Q9UPW6 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SATB2Q9UPW6 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SATB2Q9UPW6 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SATB2Q9UPW6 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC13.97□□□□□ -0.17
SATB2Q9UPW6 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.97□□□□□ -0.17
SATB2Q9UPW6 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SATB2Q9UPW6 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SATB2Q9UPW6 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SATB2Q9UPW6 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SATB2Q9UPW6 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.97□□□□□ -0.17
SATB2Q9UPW6 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
SATB2Q9UPW6 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SATB2Q9UPW6 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SATB2Q9UPW6 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SATB2Q9UPW6 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC13.97□□□□□ -0.17
SATB2Q9UPW6 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
SATB2Q9UPW6 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SATB2Q9UPW6 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC13.97□□□□□ -0.17
SATB2Q9UPW6 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.97□□□□□ -0.17
SATB2Q9UPW6 AC097065.1-201ENST00000425737 517 ntBASIC13.97□□□□□ -0.17
SATB2Q9UPW6 AL627422.1-201ENST00000434104 580 ntBASIC13.97□□□□□ -0.17
SATB2Q9UPW6 AC012362.1-201ENST00000434906 739 ntBASIC13.97□□□□□ -0.17
SATB2Q9UPW6 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SATB2Q9UPW6 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC13.97□□□□□ -0.17
SATB2Q9UPW6 CHCHD2P9-201ENST00000461726 456 ntBASIC13.97□□□□□ -0.17
SATB2Q9UPW6 AC130709.1-201ENST00000484779 1212 ntBASIC13.97□□□□□ -0.17
SATB2Q9UPW6 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC13.97□□□□□ -0.17
SATB2Q9UPW6 IGHV3-37-201ENST00000518544 340 ntBASIC13.97□□□□□ -0.17
SATB2Q9UPW6 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC13.97□□□□□ -0.17
SATB2Q9UPW6 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.97□□□□□ -0.17
SATB2Q9UPW6 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.97□□□□□ -0.17
SATB2Q9UPW6 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC13.97□□□□□ -0.17
SATB2Q9UPW6 MIR3188-201ENST00000583494 85 ntBASIC13.97□□□□□ -0.17
SATB2Q9UPW6 SIGLEC18P-201ENST00000602271 909 ntBASIC13.97□□□□□ -0.17
SATB2Q9UPW6 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.97□□□□□ -0.17
SATB2Q9UPW6 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SATB2Q9UPW6 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SATB2Q9UPW6 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SATB2Q9UPW6 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms