Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 RPL29P2-202ENST00000498671 657 ntBASIC18.83■□□□□ 0.6
PHF8Q9UPP1 AC093700.1-201ENST00000503348 717 ntBASIC18.83■□□□□ 0.6
PHF8Q9UPP1 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC18.83■□□□□ 0.6
PHF8Q9UPP1 NDUFB2P1-201ENST00000506966 295 ntBASIC18.83■□□□□ 0.6
PHF8Q9UPP1 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PHF8Q9UPP1 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC18.83■□□□□ 0.6
PHF8Q9UPP1 CCND3P2-201ENST00000579393 537 ntBASIC18.83■□□□□ 0.6
PHF8Q9UPP1 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC18.83■□□□□ 0.6
PHF8Q9UPP1 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PHF8Q9UPP1 AC009041.4-201ENST00000620075 638 ntBASIC18.83■□□□□ 0.6
PHF8Q9UPP1 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PHF8Q9UPP1 PTN-202ENST00000393083 1599 ntTSL 5 BASIC18.83■□□□□ 0.6
PHF8Q9UPP1 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC18.83■□□□□ 0.6
PHF8Q9UPP1 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PHF8Q9UPP1 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PHF8Q9UPP1 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PHF8Q9UPP1 KRT8P25-201ENST00000473150 1456 ntBASIC18.83■□□□□ 0.6
PHF8Q9UPP1 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC18.83■□□□□ 0.6
PHF8Q9UPP1 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PHF8Q9UPP1 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHF8Q9UPP1 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC18.82■□□□□ 0.6
PHF8Q9UPP1 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PHF8Q9UPP1 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC18.82■□□□□ 0.6
PHF8Q9UPP1 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC18.82■□□□□ 0.6
PHF8Q9UPP1 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHF8Q9UPP1 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHF8Q9UPP1 HSD3BP1-201ENST00000286193 1111 ntBASIC18.82■□□□□ 0.6
PHF8Q9UPP1 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHF8Q9UPP1 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHF8Q9UPP1 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC18.82■□□□□ 0.6
PHF8Q9UPP1 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHF8Q9UPP1 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC18.82■□□□□ 0.6
PHF8Q9UPP1 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC18.82■□□□□ 0.6
PHF8Q9UPP1 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC18.82■□□□□ 0.6
PHF8Q9UPP1 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC18.82■□□□□ 0.6
PHF8Q9UPP1 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC18.82■□□□□ 0.6
PHF8Q9UPP1 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC18.82■□□□□ 0.6
PHF8Q9UPP1 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PHF8Q9UPP1 TPT1P6-201ENST00000458298 514 ntBASIC18.82■□□□□ 0.6
PHF8Q9UPP1 MARK2P17-201ENST00000498560 841 ntBASIC18.82■□□□□ 0.6
PHF8Q9UPP1 IGHVII-74-1-201ENST00000517572 241 ntBASIC18.82■□□□□ 0.6
PHF8Q9UPP1 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC18.82■□□□□ 0.6
PHF8Q9UPP1 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHF8Q9UPP1 AC026790.2-201ENST00000606282 430 ntBASIC18.82■□□□□ 0.6
PHF8Q9UPP1 AC004466.2-201ENST00000614749 516 ntBASIC18.82■□□□□ 0.6
PHF8Q9UPP1 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PHF8Q9UPP1 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
PHF8Q9UPP1 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC18.82■□□□□ 0.6
PHF8Q9UPP1 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHF8Q9UPP1 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
PHF8Q9UPP1 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHF8Q9UPP1 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC18.82■□□□□ 0.6
PHF8Q9UPP1 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHF8Q9UPP1 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC18.82■□□□□ 0.6
PHF8Q9UPP1 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHF8Q9UPP1 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC18.82■□□□□ 0.6
PHF8Q9UPP1 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHF8Q9UPP1 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHF8Q9UPP1 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
PHF8Q9UPP1 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHF8Q9UPP1 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHF8Q9UPP1 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHF8Q9UPP1 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHF8Q9UPP1 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHF8Q9UPP1 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHF8Q9UPP1 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHF8Q9UPP1 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PHF8Q9UPP1 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHF8Q9UPP1 FAU-201ENST00000279259 461 ntTSL 2 BASIC18.81■□□□□ 0.6
PHF8Q9UPP1 MED15P3-201ENST00000413613 326 ntBASIC18.81■□□□□ 0.6
PHF8Q9UPP1 FAM197Y6-201ENST00000420524 766 ntBASIC18.81■□□□□ 0.6
PHF8Q9UPP1 AC092473.1-201ENST00000441098 221 ntBASIC18.81■□□□□ 0.6
PHF8Q9UPP1 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC18.81■□□□□ 0.6
PHF8Q9UPP1 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC18.81■□□□□ 0.6
PHF8Q9UPP1 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PHF8Q9UPP1 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC18.81■□□□□ 0.6
PHF8Q9UPP1 LY6E-215ENST00000523847 427 ntTSL 3 BASIC18.81■□□□□ 0.6
PHF8Q9UPP1 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC18.81■□□□□ 0.6
PHF8Q9UPP1 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC18.81■□□□□ 0.6
PHF8Q9UPP1 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC18.81■□□□□ 0.6
PHF8Q9UPP1 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHF8Q9UPP1 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.81■□□□□ 0.6
PHF8Q9UPP1 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC18.81■□□□□ 0.6
PHF8Q9UPP1 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
PHF8Q9UPP1 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC18.81■□□□□ 0.6
PHF8Q9UPP1 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHF8Q9UPP1 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC18.81■□□□□ 0.6
PHF8Q9UPP1 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PHF8Q9UPP1 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC18.81■□□□□ 0.6
PHF8Q9UPP1 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHF8Q9UPP1 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHF8Q9UPP1 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC18.81■□□□□ 0.6
PHF8Q9UPP1 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHF8Q9UPP1 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHF8Q9UPP1 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PHF8Q9UPP1 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHF8Q9UPP1 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC18.81■□□□□ 0.6
PHF8Q9UPP1 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHF8Q9UPP1 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PHF8Q9UPP1 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms