Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 AL365181.3-201ENST00000605886 3222 ntBASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 AC024075.2-201ENST00000598112 1473 ntBASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC12.44□□□□□ -0.42
KIAA1549Q9HCM3 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 MARK2P9-201ENST00000430958 1727 ntBASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 AC013553.1-201ENST00000560906 267 ntBASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 LINC00431-202ENST00000636375 159 ntBASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 AC130686.1-201ENST00000622936 2466 ntBASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 AC073869.1-201ENST00000415574 2762 ntBASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 COX5A-205ENST00000568517 582 ntTSL 3 BASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
KIAA1549Q9HCM3 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC12.42□□□□□ -0.42
KIAA1549Q9HCM3 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
KIAA1549Q9HCM3 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
KIAA1549Q9HCM3 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
KIAA1549Q9HCM3 AC093462.1-201ENST00000621167 1683 ntBASIC12.42□□□□□ -0.42
KIAA1549Q9HCM3 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
KIAA1549Q9HCM3 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
KIAA1549Q9HCM3 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC12.42□□□□□ -0.42
KIAA1549Q9HCM3 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
KIAA1549Q9HCM3 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
KIAA1549Q9HCM3 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC12.42□□□□□ -0.42
KIAA1549Q9HCM3 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
KIAA1549Q9HCM3 AL365181.1-201ENST00000564032 1828 ntBASIC12.42□□□□□ -0.42
KIAA1549Q9HCM3 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
KIAA1549Q9HCM3 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
KIAA1549Q9HCM3 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC12.42□□□□□ -0.42
KIAA1549Q9HCM3 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC12.42□□□□□ -0.42
KIAA1549Q9HCM3 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms