Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
AMBRA1Q9C0C7 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC13.3□□□□□ -0.28
AMBRA1Q9C0C7 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
AMBRA1Q9C0C7 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
AMBRA1Q9C0C7 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.3□□□□□ -0.28
AMBRA1Q9C0C7 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
AMBRA1Q9C0C7 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
AMBRA1Q9C0C7 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
AMBRA1Q9C0C7 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
AMBRA1Q9C0C7 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.3□□□□□ -0.28
AMBRA1Q9C0C7 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
AMBRA1Q9C0C7 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AMBRA1Q9C0C7 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
AMBRA1Q9C0C7 TMBIM7P-202ENST00000641474 1516 ntBASIC13.3□□□□□ -0.28
AMBRA1Q9C0C7 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AMBRA1Q9C0C7 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC13.3□□□□□ -0.28
AMBRA1Q9C0C7 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AMBRA1Q9C0C7 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
AMBRA1Q9C0C7 AC006001.1-201ENST00000325130 474 ntBASIC13.3□□□□□ -0.28
AMBRA1Q9C0C7 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
AMBRA1Q9C0C7 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.3□□□□□ -0.28
AMBRA1Q9C0C7 FAM197Y7-201ENST00000432892 766 ntBASIC13.3□□□□□ -0.28
AMBRA1Q9C0C7 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.3□□□□□ -0.28
AMBRA1Q9C0C7 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.3□□□□□ -0.28
AMBRA1Q9C0C7 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.3□□□□□ -0.28
AMBRA1Q9C0C7 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.3□□□□□ -0.28
AMBRA1Q9C0C7 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
AMBRA1Q9C0C7 RN7SL713P-201ENST00000582127 302 ntBASIC13.3□□□□□ -0.28
AMBRA1Q9C0C7 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC13.3□□□□□ -0.28
AMBRA1Q9C0C7 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
AMBRA1Q9C0C7 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
AMBRA1Q9C0C7 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
AMBRA1Q9C0C7 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC13.3□□□□□ -0.28
AMBRA1Q9C0C7 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.3□□□□□ -0.28
AMBRA1Q9C0C7 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
AMBRA1Q9C0C7 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AMBRA1Q9C0C7 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AMBRA1Q9C0C7 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
AMBRA1Q9C0C7 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
AMBRA1Q9C0C7 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC13.3□□□□□ -0.28
AMBRA1Q9C0C7 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC13.3□□□□□ -0.28
AMBRA1Q9C0C7 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AMBRA1Q9C0C7 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
AMBRA1Q9C0C7 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.3□□□□□ -0.28
AMBRA1Q9C0C7 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AMBRA1Q9C0C7 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
AMBRA1Q9C0C7 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
AMBRA1Q9C0C7 AC010970.1-201ENST00000445125 1848 ntBASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 GOLGA2P5-201ENST00000266746 2395 ntBASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 AL136309.1-201ENST00000403917 691 ntBASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 AC010141.1-201ENST00000411585 623 ntBASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 COX5BP1-201ENST00000507622 393 ntBASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.29□□□□□ -0.28
AMBRA1Q9C0C7 RN7SL219P-201ENST00000582872 296 ntBASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms