Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 STK16-203ENST00000409516 895 ntTSL 2 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 GUSBP10-201ENST00000417412 665 ntBASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 ERP29P1-201ENST00000442902 706 ntBASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 AC114501.1-201ENST00000445949 172 ntBASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 ART2BP-201ENST00000453501 499 ntBASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 DPY19L2P5-201ENST00000456300 331 ntBASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 TPT1P11-201ENST00000458482 498 ntBASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 SCARNA12-201ENST00000459155 270 ntBASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 CHCHD2P9-201ENST00000461726 456 ntBASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 RNA5SP406-201ENST00000516106 112 ntBASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 IGHV3-37-201ENST00000518544 340 ntBASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 AP000911.2-201ENST00000534330 502 ntBASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 RN7SL357P-201ENST00000581065 298 ntBASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 AC025165.5-201ENST00000602802 578 ntBASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 AC025271.4-201ENST00000621477 1726 ntBASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms