Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC12.63□□□□□ -0.39
RFT1Q96AA3 ENPP7P14-201ENST00000621765 1040 ntBASIC12.63□□□□□ -0.39
RFT1Q96AA3 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC12.63□□□□□ -0.39
RFT1Q96AA3 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC12.63□□□□□ -0.39
RFT1Q96AA3 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RFT1Q96AA3 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RFT1Q96AA3 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.63□□□□□ -0.39
RFT1Q96AA3 AL805961.2-201ENST00000642139 4817 ntBASIC12.63□□□□□ -0.39
RFT1Q96AA3 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
RFT1Q96AA3 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RFT1Q96AA3 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RFT1Q96AA3 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC12.63□□□□□ -0.39
RFT1Q96AA3 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
RFT1Q96AA3 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
RFT1Q96AA3 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
RFT1Q96AA3 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RFT1Q96AA3 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
RFT1Q96AA3 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC12.63□□□□□ -0.39
RFT1Q96AA3 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
RFT1Q96AA3 AC134312.5-201ENST00000568031 1313 ntBASIC12.62□□□□□ -0.39
RFT1Q96AA3 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RFT1Q96AA3 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RFT1Q96AA3 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RFT1Q96AA3 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.62□□□□□ -0.39
RFT1Q96AA3 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
RFT1Q96AA3 AC010970.1-201ENST00000445125 1848 ntBASIC12.62□□□□□ -0.39
RFT1Q96AA3 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RFT1Q96AA3 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RFT1Q96AA3 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
RFT1Q96AA3 AC106818.1-201ENST00000623223 3242 ntBASIC12.62□□□□□ -0.39
RFT1Q96AA3 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RFT1Q96AA3 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC12.62□□□□□ -0.39
RFT1Q96AA3 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC12.62□□□□□ -0.39
RFT1Q96AA3 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC12.62□□□□□ -0.39
RFT1Q96AA3 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RFT1Q96AA3 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RFT1Q96AA3 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC12.62□□□□□ -0.39
RFT1Q96AA3 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RFT1Q96AA3 AC139712.1-201ENST00000378256 1875 ntBASIC12.62□□□□□ -0.39
RFT1Q96AA3 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RFT1Q96AA3 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RFT1Q96AA3 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RFT1Q96AA3 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC12.62□□□□□ -0.39
RFT1Q96AA3 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RFT1Q96AA3 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
RFT1Q96AA3 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RFT1Q96AA3 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC12.62□□□□□ -0.39
RFT1Q96AA3 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RFT1Q96AA3 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RFT1Q96AA3 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
RFT1Q96AA3 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
RFT1Q96AA3 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RFT1Q96AA3 DGCR5-201ENST00000399539 862 ntBASIC12.62□□□□□ -0.39
RFT1Q96AA3 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RFT1Q96AA3 WDR53-203ENST00000429115 683 ntTSL 2 BASIC12.62□□□□□ -0.39
RFT1Q96AA3 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC12.62□□□□□ -0.39
RFT1Q96AA3 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC12.62□□□□□ -0.39
RFT1Q96AA3 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC12.62□□□□□ -0.39
RFT1Q96AA3 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RFT1Q96AA3 MESTP3-201ENST00000503460 968 ntBASIC12.62□□□□□ -0.39
RFT1Q96AA3 TDH-203ENST00000531764 1110 ntBASIC12.62□□□□□ -0.39
RFT1Q96AA3 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC12.62□□□□□ -0.39
RFT1Q96AA3 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.62□□□□□ -0.39
RFT1Q96AA3 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC12.62□□□□□ -0.39
RFT1Q96AA3 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC12.62□□□□□ -0.39
RFT1Q96AA3 AC138466.3-201ENST00000619983 221 ntBASIC12.62□□□□□ -0.39
RFT1Q96AA3 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RFT1Q96AA3 ZEB2-234ENST00000636413 8984 ntTSL 5 BASIC12.62□□□□□ -0.39
RFT1Q96AA3 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RFT1Q96AA3 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RFT1Q96AA3 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RFT1Q96AA3 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RFT1Q96AA3 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
RFT1Q96AA3 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC12.62□□□□□ -0.39
RFT1Q96AA3 MYO9B-206ENST00000595618 7623 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RFT1Q96AA3 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
RFT1Q96AA3 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RFT1Q96AA3 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RFT1Q96AA3 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RFT1Q96AA3 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RFT1Q96AA3 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RFT1Q96AA3 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RFT1Q96AA3 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RFT1Q96AA3 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
RFT1Q96AA3 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RFT1Q96AA3 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC12.62□□□□□ -0.39
RFT1Q96AA3 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.62□□□□□ -0.39
RFT1Q96AA3 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
RFT1Q96AA3 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RFT1Q96AA3 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RFT1Q96AA3 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RFT1Q96AA3 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC12.61□□□□□ -0.39
RFT1Q96AA3 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RFT1Q96AA3 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
RFT1Q96AA3 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RFT1Q96AA3 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC12.61□□□□□ -0.39
RFT1Q96AA3 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC12.61□□□□□ -0.39
RFT1Q96AA3 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RFT1Q96AA3 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
RFT1Q96AA3 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms