Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC15.91■□□□□ 0.14
TNFRSF25Q93038 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
TNFRSF25Q93038 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
TNFRSF25Q93038 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TNFRSF25Q93038 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
TNFRSF25Q93038 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC15.91■□□□□ 0.14
TNFRSF25Q93038 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
TNFRSF25Q93038 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC15.9■□□□□ 0.14
TNFRSF25Q93038 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TNFRSF25Q93038 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC15.9■□□□□ 0.14
TNFRSF25Q93038 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TNFRSF25Q93038 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TNFRSF25Q93038 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC15.9■□□□□ 0.14
TNFRSF25Q93038 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TNFRSF25Q93038 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TNFRSF25Q93038 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC15.9■□□□□ 0.14
TNFRSF25Q93038 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TNFRSF25Q93038 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TNFRSF25Q93038 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TNFRSF25Q93038 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TNFRSF25Q93038 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TNFRSF25Q93038 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TNFRSF25Q93038 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TNFRSF25Q93038 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TNFRSF25Q93038 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TNFRSF25Q93038 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC15.9■□□□□ 0.14
TNFRSF25Q93038 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC15.9■□□□□ 0.14
TNFRSF25Q93038 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC15.9■□□□□ 0.14
TNFRSF25Q93038 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC15.9■□□□□ 0.14
TNFRSF25Q93038 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC15.9■□□□□ 0.14
TNFRSF25Q93038 RN7SL720P-201ENST00000488178 304 ntBASIC15.9■□□□□ 0.14
TNFRSF25Q93038 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TNFRSF25Q93038 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC15.9■□□□□ 0.14
TNFRSF25Q93038 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC15.9■□□□□ 0.14
TNFRSF25Q93038 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC15.9■□□□□ 0.14
TNFRSF25Q93038 MIR4326-201ENST00000582203 59 ntBASIC15.9■□□□□ 0.14
TNFRSF25Q93038 MIR4522-201ENST00000584932 87 ntBASIC15.9■□□□□ 0.14
TNFRSF25Q93038 SIGLEC22P-201ENST00000599104 714 ntBASIC15.9■□□□□ 0.14
TNFRSF25Q93038 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC15.9■□□□□ 0.14
TNFRSF25Q93038 AC091769.1-201ENST00000619576 568 ntBASIC15.9■□□□□ 0.14
TNFRSF25Q93038 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TNFRSF25Q93038 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC15.9■□□□□ 0.14
TNFRSF25Q93038 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
TNFRSF25Q93038 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC15.9■□□□□ 0.14
TNFRSF25Q93038 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
TNFRSF25Q93038 AC019109.1-201ENST00000401725 1874 ntBASIC15.9■□□□□ 0.14
TNFRSF25Q93038 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC15.9■□□□□ 0.14
TNFRSF25Q93038 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TNFRSF25Q93038 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.9■□□□□ 0.14
TNFRSF25Q93038 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TNFRSF25Q93038 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC15.9■□□□□ 0.14
TNFRSF25Q93038 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TNFRSF25Q93038 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
TNFRSF25Q93038 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TNFRSF25Q93038 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
TNFRSF25Q93038 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TNFRSF25Q93038 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TNFRSF25Q93038 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC15.89■□□□□ 0.13
TNFRSF25Q93038 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC15.89■□□□□ 0.13
TNFRSF25Q93038 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TNFRSF25Q93038 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TNFRSF25Q93038 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TNFRSF25Q93038 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
TNFRSF25Q93038 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
TNFRSF25Q93038 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TNFRSF25Q93038 SAT1-201ENST00000379251 801 ntTSL 2 BASIC15.89■□□□□ 0.13
TNFRSF25Q93038 SAT1-202ENST00000379253 909 ntTSL 2 BASIC15.89■□□□□ 0.13
TNFRSF25Q93038 SAT1-203ENST00000379254 868 ntTSL 3 BASIC15.89■□□□□ 0.13
TNFRSF25Q93038 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TNFRSF25Q93038 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TNFRSF25Q93038 GGTLC4P-201ENST00000402176 664 ntBASIC15.89■□□□□ 0.13
TNFRSF25Q93038 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TNFRSF25Q93038 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TNFRSF25Q93038 AC092573.1-201ENST00000433054 884 ntBASIC15.89■□□□□ 0.13
TNFRSF25Q93038 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC15.89■□□□□ 0.13
TNFRSF25Q93038 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC15.89■□□□□ 0.13
TNFRSF25Q93038 AC234782.1-201ENST00000451950 919 ntBASIC15.89■□□□□ 0.13
TNFRSF25Q93038 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TNFRSF25Q93038 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC15.89■□□□□ 0.13
TNFRSF25Q93038 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC15.89■□□□□ 0.13
TNFRSF25Q93038 MRPL22P1-201ENST00000505398 616 ntBASIC15.89■□□□□ 0.13
TNFRSF25Q93038 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC15.89■□□□□ 0.13
TNFRSF25Q93038 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC15.89■□□□□ 0.13
TNFRSF25Q93038 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC15.89■□□□□ 0.13
TNFRSF25Q93038 AC145285.5-201ENST00000562217 361 ntBASIC15.89■□□□□ 0.13
TNFRSF25Q93038 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC15.89■□□□□ 0.13
TNFRSF25Q93038 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC15.89■□□□□ 0.13
TNFRSF25Q93038 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TNFRSF25Q93038 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TNFRSF25Q93038 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TNFRSF25Q93038 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TNFRSF25Q93038 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC15.89■□□□□ 0.13
TNFRSF25Q93038 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
TNFRSF25Q93038 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TNFRSF25Q93038 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC15.89■□□□□ 0.13
TNFRSF25Q93038 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TNFRSF25Q93038 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TNFRSF25Q93038 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TNFRSF25Q93038 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TNFRSF25Q93038 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms