Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
STAG1Q8WVM7 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
STAG1Q8WVM7 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC16.57■□□□□ 0.24
STAG1Q8WVM7 AC015909.5-201ENST00000624336 2266 ntBASIC16.57■□□□□ 0.24
STAG1Q8WVM7 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC16.57■□□□□ 0.24
STAG1Q8WVM7 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
STAG1Q8WVM7 SALL4P6-201ENST00000429385 1691 ntBASIC16.57■□□□□ 0.24
STAG1Q8WVM7 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC16.57■□□□□ 0.24
STAG1Q8WVM7 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
STAG1Q8WVM7 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
STAG1Q8WVM7 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
STAG1Q8WVM7 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC16.57■□□□□ 0.24
STAG1Q8WVM7 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC16.57■□□□□ 0.24
STAG1Q8WVM7 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
STAG1Q8WVM7 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
STAG1Q8WVM7 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC16.57■□□□□ 0.24
STAG1Q8WVM7 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
STAG1Q8WVM7 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC16.57■□□□□ 0.24
STAG1Q8WVM7 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC16.57■□□□□ 0.24
STAG1Q8WVM7 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC16.57■□□□□ 0.24
STAG1Q8WVM7 AC008267.1-201ENST00000474858 1069 ntBASIC16.57■□□□□ 0.24
STAG1Q8WVM7 IQSEC3P1-201ENST00000538799 536 ntBASIC16.57■□□□□ 0.24
STAG1Q8WVM7 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC16.57■□□□□ 0.24
STAG1Q8WVM7 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC16.57■□□□□ 0.24
STAG1Q8WVM7 MIR4265-201ENST00000582152 99 ntBASIC16.57■□□□□ 0.24
STAG1Q8WVM7 MIR5572-201ENST00000583188 137 ntBASIC16.57■□□□□ 0.24
STAG1Q8WVM7 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC16.57■□□□□ 0.24
STAG1Q8WVM7 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC16.57■□□□□ 0.24
STAG1Q8WVM7 AC084781.1-201ENST00000613737 656 ntBASIC16.57■□□□□ 0.24
STAG1Q8WVM7 HPX-213ENST00000615166 826 ntTSL 5 BASIC16.57■□□□□ 0.24
STAG1Q8WVM7 AP001184.1-201ENST00000637936 376 ntBASIC16.57■□□□□ 0.24
STAG1Q8WVM7 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
STAG1Q8WVM7 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
STAG1Q8WVM7 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
STAG1Q8WVM7 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
STAG1Q8WVM7 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC16.57■□□□□ 0.24
STAG1Q8WVM7 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
STAG1Q8WVM7 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
STAG1Q8WVM7 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
STAG1Q8WVM7 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
STAG1Q8WVM7 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
STAG1Q8WVM7 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
STAG1Q8WVM7 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
STAG1Q8WVM7 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
STAG1Q8WVM7 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
STAG1Q8WVM7 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
STAG1Q8WVM7 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
STAG1Q8WVM7 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
STAG1Q8WVM7 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
STAG1Q8WVM7 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC16.56■□□□□ 0.24
STAG1Q8WVM7 CETP-203ENST00000566128 1733 ntTSL 5 BASIC16.56■□□□□ 0.24
STAG1Q8WVM7 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
STAG1Q8WVM7 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
STAG1Q8WVM7 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
STAG1Q8WVM7 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
STAG1Q8WVM7 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
STAG1Q8WVM7 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
STAG1Q8WVM7 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
STAG1Q8WVM7 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
STAG1Q8WVM7 PYY2-201ENST00000315776 282 ntBASIC16.56■□□□□ 0.24
STAG1Q8WVM7 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
STAG1Q8WVM7 NME4-203ENST00000397722 1232 ntTSL 2 BASIC16.56■□□□□ 0.24
STAG1Q8WVM7 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
STAG1Q8WVM7 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC16.56■□□□□ 0.24
STAG1Q8WVM7 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC16.56■□□□□ 0.24
STAG1Q8WVM7 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
STAG1Q8WVM7 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC16.56■□□□□ 0.24
STAG1Q8WVM7 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC16.56■□□□□ 0.24
STAG1Q8WVM7 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC16.56■□□□□ 0.24
STAG1Q8WVM7 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC16.56■□□□□ 0.24
STAG1Q8WVM7 AC138701.2-201ENST00000553634 226 ntBASIC16.56■□□□□ 0.24
STAG1Q8WVM7 MT3-203ENST00000565838 421 ntTSL 3 BASIC16.56■□□□□ 0.24
STAG1Q8WVM7 AC132825.4-202ENST00000578792 434 ntBASIC16.56■□□□□ 0.24
STAG1Q8WVM7 NAT9-224ENST00000583757 583 ntTSL 3 BASIC16.56■□□□□ 0.24
STAG1Q8WVM7 MIR2392-201ENST00000584881 84 ntBASIC16.56■□□□□ 0.24
STAG1Q8WVM7 MIR6842-201ENST00000612539 65 ntBASIC16.56■□□□□ 0.24
STAG1Q8WVM7 SNX1-214ENST00000625244 324 ntTSL 5 BASIC16.56■□□□□ 0.24
STAG1Q8WVM7 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
STAG1Q8WVM7 AC007326.2-201ENST00000624224 7579 ntBASIC16.56■□□□□ 0.24
STAG1Q8WVM7 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
STAG1Q8WVM7 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
STAG1Q8WVM7 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC16.56■□□□□ 0.24
STAG1Q8WVM7 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC16.56■□□□□ 0.24
STAG1Q8WVM7 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
STAG1Q8WVM7 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
STAG1Q8WVM7 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
STAG1Q8WVM7 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
STAG1Q8WVM7 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC16.56■□□□□ 0.24
STAG1Q8WVM7 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
STAG1Q8WVM7 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
STAG1Q8WVM7 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC16.55■□□□□ 0.24
STAG1Q8WVM7 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
STAG1Q8WVM7 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
STAG1Q8WVM7 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC16.55■□□□□ 0.24
STAG1Q8WVM7 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
STAG1Q8WVM7 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
STAG1Q8WVM7 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
STAG1Q8WVM7 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
STAG1Q8WVM7 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
STAG1Q8WVM7 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms