Protein–RNA interactions for Protein: Q8IX21

SLF2, SMC5-SMC6 complex localization factor protein 2, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2Q8IX21 AC061965.1-201ENST00000560524 1465 ntBASIC16.78■□□□□ 0.28
SLF2Q8IX21 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SLF2Q8IX21 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.78■□□□□ 0.28
SLF2Q8IX21 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
SLF2Q8IX21 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC16.78■□□□□ 0.28
SLF2Q8IX21 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SLF2Q8IX21 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.78■□□□□ 0.28
SLF2Q8IX21 KCP-203ENST00000610776 5108 ntTSL 5 BASIC16.78■□□□□ 0.28
SLF2Q8IX21 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.28
SLF2Q8IX21 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.77■□□□□ 0.28
SLF2Q8IX21 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLF2Q8IX21 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLF2Q8IX21 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLF2Q8IX21 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLF2Q8IX21 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLF2Q8IX21 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SLF2Q8IX21 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
SLF2Q8IX21 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC16.77■□□□□ 0.28
SLF2Q8IX21 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLF2Q8IX21 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLF2Q8IX21 BX640514.1-201ENST00000583223 1918 ntBASIC16.77■□□□□ 0.28
SLF2Q8IX21 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLF2Q8IX21 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
SLF2Q8IX21 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
SLF2Q8IX21 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLF2Q8IX21 AP000354.1-201ENST00000396982 456 ntBASIC16.77■□□□□ 0.28
SLF2Q8IX21 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
SLF2Q8IX21 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLF2Q8IX21 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLF2Q8IX21 ACTBP14-201ENST00000411655 1089 ntBASIC16.77■□□□□ 0.28
SLF2Q8IX21 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLF2Q8IX21 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC16.77■□□□□ 0.28
SLF2Q8IX21 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC16.77■□□□□ 0.28
SLF2Q8IX21 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC16.77■□□□□ 0.28
SLF2Q8IX21 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC16.77■□□□□ 0.28
SLF2Q8IX21 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLF2Q8IX21 NAMA-206ENST00000605377 509 ntTSL 5 BASIC16.77■□□□□ 0.28
SLF2Q8IX21 AC010976.2-201ENST00000609697 852 ntBASIC16.77■□□□□ 0.28
SLF2Q8IX21 MIR6746-201ENST00000620971 63 ntBASIC16.77■□□□□ 0.28
SLF2Q8IX21 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
SLF2Q8IX21 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.77■□□□□ 0.28
SLF2Q8IX21 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLF2Q8IX21 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
SLF2Q8IX21 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC16.77■□□□□ 0.27
SLF2Q8IX21 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLF2Q8IX21 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
SLF2Q8IX21 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.27
SLF2Q8IX21 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC16.77■□□□□ 0.27
SLF2Q8IX21 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SLF2Q8IX21 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLF2Q8IX21 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLF2Q8IX21 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.77■□□□□ 0.27
SLF2Q8IX21 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLF2Q8IX21 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLF2Q8IX21 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
SLF2Q8IX21 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SLF2Q8IX21 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SLF2Q8IX21 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLF2Q8IX21 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC16.76■□□□□ 0.27
SLF2Q8IX21 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLF2Q8IX21 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLF2Q8IX21 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SLF2Q8IX21 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC16.76■□□□□ 0.27
SLF2Q8IX21 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLF2Q8IX21 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLF2Q8IX21 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC16.76■□□□□ 0.27
SLF2Q8IX21 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLF2Q8IX21 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLF2Q8IX21 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC16.76■□□□□ 0.27
SLF2Q8IX21 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC16.76■□□□□ 0.27
SLF2Q8IX21 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC16.76■□□□□ 0.27
SLF2Q8IX21 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC16.76■□□□□ 0.27
SLF2Q8IX21 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC16.76■□□□□ 0.27
SLF2Q8IX21 PSMD4P1-201ENST00000433951 1109 ntBASIC16.76■□□□□ 0.27
SLF2Q8IX21 RPL13AP19-201ENST00000434320 584 ntBASIC16.76■□□□□ 0.27
SLF2Q8IX21 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC16.76■□□□□ 0.27
SLF2Q8IX21 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SLF2Q8IX21 C2orf69P1-201ENST00000563532 1093 ntBASIC16.76■□□□□ 0.27
SLF2Q8IX21 CES1P2-201ENST00000566467 1242 ntBASIC16.76■□□□□ 0.27
SLF2Q8IX21 AC005777.1-201ENST00000588332 187 ntBASIC16.76■□□□□ 0.27
SLF2Q8IX21 AC127024.7-201ENST00000625101 200 ntBASIC16.76■□□□□ 0.27
SLF2Q8IX21 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLF2Q8IX21 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLF2Q8IX21 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLF2Q8IX21 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SLF2Q8IX21 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLF2Q8IX21 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLF2Q8IX21 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
SLF2Q8IX21 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLF2Q8IX21 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLF2Q8IX21 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLF2Q8IX21 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLF2Q8IX21 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.76■□□□□ 0.27
SLF2Q8IX21 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC16.76■□□□□ 0.27
SLF2Q8IX21 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC16.76■□□□□ 0.27
SLF2Q8IX21 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLF2Q8IX21 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLF2Q8IX21 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLF2Q8IX21 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLF2Q8IX21 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms