Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC12.58□□□□□ -0.4
LINC00346Q8IVM7 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC12.58□□□□□ -0.4
LINC00346Q8IVM7 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC12.58□□□□□ -0.4
LINC00346Q8IVM7 PAM16-211ENST00000575848 518 ntTSL 3 BASIC12.58□□□□□ -0.4
LINC00346Q8IVM7 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
LINC00346Q8IVM7 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC12.58□□□□□ -0.4
LINC00346Q8IVM7 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC12.58□□□□□ -0.4
LINC00346Q8IVM7 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC12.58□□□□□ -0.4
LINC00346Q8IVM7 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC12.58□□□□□ -0.4
LINC00346Q8IVM7 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00346Q8IVM7 COX11-210ENST00000639671 696 ntBASIC12.58□□□□□ -0.4
LINC00346Q8IVM7 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
LINC00346Q8IVM7 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00346Q8IVM7 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00346Q8IVM7 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00346Q8IVM7 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00346Q8IVM7 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
LINC00346Q8IVM7 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00346Q8IVM7 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC12.58□□□□□ -0.4
LINC00346Q8IVM7 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00346Q8IVM7 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC12.58□□□□□ -0.4
LINC00346Q8IVM7 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00346Q8IVM7 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00346Q8IVM7 LINC00115-201ENST00000473798 1317 ntBASIC12.58□□□□□ -0.4
LINC00346Q8IVM7 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00346Q8IVM7 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00346Q8IVM7 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
LINC00346Q8IVM7 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC12.58□□□□□ -0.4
LINC00346Q8IVM7 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC12.58□□□□□ -0.4
LINC00346Q8IVM7 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 AC020658.7-201ENST00000624274 2442 ntBASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 AC092580.1-201ENST00000433998 658 ntBASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 BNIP3P42-201ENST00000454982 569 ntBASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 MAX-218ENST00000557746 571 ntTSL 4 BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 BNIP3P29-201ENST00000598302 571 ntBASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 KLK11-210ENST00000600362 759 ntTSL 3 BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 AC017083.2-201ENST00000608069 979 ntBASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 AC011447.5-201ENST00000616168 564 ntBASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 AC007952.5-201ENST00000572818 1486 ntBASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 AC063926.2-201ENST00000623766 1308 ntBASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms