Protein–RNA interactions for Protein: Q5VXM1

CDCP2, CUB domain-containing protein 2, humanhuman

Predictions only

Length 449 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP2Q5VXM1 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 AC015909.5-201ENST00000624336 2266 ntBASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 AL022313.4-201ENST00000562756 2046 ntBASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 SIRPB3P-201ENST00000340424 1216 ntBASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 MIR1307-201ENST00000408840 149 ntBASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 RNLS-203ENST00000437752 525 ntTSL 2 BASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 GOLGA6L16P-201ENST00000441780 1299 ntBASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 TPT1P11-201ENST00000458482 498 ntBASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 RN7SL351P-201ENST00000469306 248 ntBASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 RN7SL121P-201ENST00000584223 273 ntBASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 AC026336.4-201ENST00000624565 1050 ntBASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 CASP16P-204ENST00000635032 809 ntBASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 AC139713.2-207ENST00000641556 1292 ntBASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 AL139158.3-201ENST00000641212 1562 ntBASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.31□□□□□ -0.28
CDCP2Q5VXM1 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CDCP2Q5VXM1 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CDCP2Q5VXM1 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDCP2Q5VXM1 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13.3□□□□□ -0.28
CDCP2Q5VXM1 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDCP2Q5VXM1 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CDCP2Q5VXM1 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CDCP2Q5VXM1 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.3□□□□□ -0.28
CDCP2Q5VXM1 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDCP2Q5VXM1 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDCP2Q5VXM1 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CDCP2Q5VXM1 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CDCP2Q5VXM1 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDCP2Q5VXM1 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.3□□□□□ -0.28
CDCP2Q5VXM1 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.3□□□□□ -0.28
CDCP2Q5VXM1 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDCP2Q5VXM1 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDCP2Q5VXM1 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
CDCP2Q5VXM1 AC106827.1-201ENST00000366454 431 ntBASIC13.3□□□□□ -0.28
CDCP2Q5VXM1 RHOC-205ENST00000369636 786 ntTSL 2 BASIC13.3□□□□□ -0.28
CDCP2Q5VXM1 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CDCP2Q5VXM1 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC13.3□□□□□ -0.28
CDCP2Q5VXM1 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC13.3□□□□□ -0.28
CDCP2Q5VXM1 STK33P1-201ENST00000423835 1218 ntBASIC13.3□□□□□ -0.28
CDCP2Q5VXM1 SERBP1P2-201ENST00000436888 1164 ntBASIC13.3□□□□□ -0.28
CDCP2Q5VXM1 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC13.3□□□□□ -0.28
CDCP2Q5VXM1 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC13.3□□□□□ -0.28
CDCP2Q5VXM1 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC13.3□□□□□ -0.28
CDCP2Q5VXM1 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC13.3□□□□□ -0.28
CDCP2Q5VXM1 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CDCP2Q5VXM1 AC078814.4-201ENST00000546650 327 ntBASIC13.3□□□□□ -0.28
CDCP2Q5VXM1 AL359219.1-201ENST00000556311 934 ntBASIC13.3□□□□□ -0.28
CDCP2Q5VXM1 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
CDCP2Q5VXM1 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC13.3□□□□□ -0.28
CDCP2Q5VXM1 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC13.3□□□□□ -0.28
CDCP2Q5VXM1 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC13.3□□□□□ -0.28
CDCP2Q5VXM1 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CDCP2Q5VXM1 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDCP2Q5VXM1 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.3□□□□□ -0.28
CDCP2Q5VXM1 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CDCP2Q5VXM1 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
CDCP2Q5VXM1 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
CDCP2Q5VXM1 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.3□□□□□ -0.28
CDCP2Q5VXM1 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CDCP2Q5VXM1 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDCP2Q5VXM1 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC13.3□□□□□ -0.28
CDCP2Q5VXM1 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC13.3□□□□□ -0.28
CDCP2Q5VXM1 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms