Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RBM48Q5RL73 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RBM48Q5RL73 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RBM48Q5RL73 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RBM48Q5RL73 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
RBM48Q5RL73 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RBM48Q5RL73 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RBM48Q5RL73 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RBM48Q5RL73 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RBM48Q5RL73 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
RBM48Q5RL73 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RBM48Q5RL73 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
RBM48Q5RL73 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RBM48Q5RL73 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
RBM48Q5RL73 COA5-202ENST00000409997 557 ntTSL 4 BASIC12.93□□□□□ -0.34
RBM48Q5RL73 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RBM48Q5RL73 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC12.93□□□□□ -0.34
RBM48Q5RL73 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC12.93□□□□□ -0.34
RBM48Q5RL73 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC12.93□□□□□ -0.34
RBM48Q5RL73 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC12.93□□□□□ -0.34
RBM48Q5RL73 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC12.93□□□□□ -0.34
RBM48Q5RL73 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RBM48Q5RL73 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
RBM48Q5RL73 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC12.93□□□□□ -0.34
RBM48Q5RL73 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC12.93□□□□□ -0.34
RBM48Q5RL73 BRI3BPP1-201ENST00000594224 787 ntBASIC12.93□□□□□ -0.34
RBM48Q5RL73 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC12.93□□□□□ -0.34
RBM48Q5RL73 AL844908.2-201ENST00000609461 460 ntBASIC12.93□□□□□ -0.34
RBM48Q5RL73 AP005019.2-201ENST00000615104 511 ntBASIC12.93□□□□□ -0.34
RBM48Q5RL73 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
RBM48Q5RL73 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC12.93□□□□□ -0.34
RBM48Q5RL73 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RBM48Q5RL73 USB1-207ENST00000563149 1751 ntTSL 2 BASIC12.93□□□□□ -0.34
RBM48Q5RL73 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
RBM48Q5RL73 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RBM48Q5RL73 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RBM48Q5RL73 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC12.93□□□□□ -0.34
RBM48Q5RL73 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC12.93□□□□□ -0.34
RBM48Q5RL73 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
RBM48Q5RL73 ELOVL6-201ENST00000302274 3090 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
RBM48Q5RL73 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
RBM48Q5RL73 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RBM48Q5RL73 CYP24A1-203ENST00000395955 2227 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RBM48Q5RL73 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RBM48Q5RL73 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RBM48Q5RL73 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RBM48Q5RL73 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
RBM48Q5RL73 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RBM48Q5RL73 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
RBM48Q5RL73 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RBM48Q5RL73 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RBM48Q5RL73 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
RBM48Q5RL73 INTS4P2-202ENST00000614726 2019 ntBASIC12.93□□□□□ -0.34
RBM48Q5RL73 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
RBM48Q5RL73 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RBM48Q5RL73 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
RBM48Q5RL73 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
RBM48Q5RL73 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC12.92□□□□□ -0.34
RBM48Q5RL73 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RBM48Q5RL73 FLJ30679-201ENST00000624773 1980 ntBASIC12.92□□□□□ -0.34
RBM48Q5RL73 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.92□□□□□ -0.34
RBM48Q5RL73 AC092028.1-202ENST00000641483 3547 ntBASIC12.92□□□□□ -0.34
RBM48Q5RL73 AC092028.1-201ENST00000641781 3540 ntBASIC12.92□□□□□ -0.34
RBM48Q5RL73 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
RBM48Q5RL73 AL590824.1-201ENST00000403828 1349 ntBASIC12.92□□□□□ -0.34
RBM48Q5RL73 FKBP4P6-201ENST00000457486 1332 ntBASIC12.92□□□□□ -0.34
RBM48Q5RL73 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RBM48Q5RL73 PID1-202ENST00000392054 2745 ntTSL 2 BASIC12.92□□□□□ -0.34
RBM48Q5RL73 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RBM48Q5RL73 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RBM48Q5RL73 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
RBM48Q5RL73 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC12.92□□□□□ -0.34
RBM48Q5RL73 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC12.92□□□□□ -0.34
RBM48Q5RL73 AL356966.1-201ENST00000454752 2367 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RBM48Q5RL73 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RBM48Q5RL73 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
RBM48Q5RL73 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RBM48Q5RL73 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
RBM48Q5RL73 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RBM48Q5RL73 HNRNPFP1-201ENST00000391730 1133 ntBASIC12.92□□□□□ -0.34
RBM48Q5RL73 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
RBM48Q5RL73 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
RBM48Q5RL73 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RBM48Q5RL73 LINC01428-201ENST00000449581 874 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RBM48Q5RL73 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RBM48Q5RL73 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
RBM48Q5RL73 AC125807.1-201ENST00000483097 614 ntBASIC12.92□□□□□ -0.34
RBM48Q5RL73 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC12.92□□□□□ -0.34
RBM48Q5RL73 AC027369.6-201ENST00000525520 931 ntBASIC12.92□□□□□ -0.34
RBM48Q5RL73 AC068587.3-201ENST00000526613 355 ntBASIC12.92□□□□□ -0.34
RBM48Q5RL73 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
RBM48Q5RL73 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC12.92□□□□□ -0.34
RBM48Q5RL73 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RBM48Q5RL73 AL512310.5-201ENST00000551999 515 ntBASIC12.92□□□□□ -0.34
RBM48Q5RL73 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC12.92□□□□□ -0.34
RBM48Q5RL73 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RBM48Q5RL73 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RBM48Q5RL73 AL121894.2-201ENST00000602977 491 ntBASIC12.92□□□□□ -0.34
RBM48Q5RL73 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC12.92□□□□□ -0.34
RBM48Q5RL73 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms