Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
H3F3AP84243 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
H3F3AP84243 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.65□□□□□ -0.38
H3F3AP84243 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
H3F3AP84243 TUBB4AP1-201ENST00000450755 1325 ntBASIC12.65□□□□□ -0.38
H3F3AP84243 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
H3F3AP84243 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC12.65□□□□□ -0.38
H3F3AP84243 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3F3AP84243 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.65□□□□□ -0.38
H3F3AP84243 AL139158.3-201ENST00000641212 1562 ntBASIC12.65□□□□□ -0.38
H3F3AP84243 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3F3AP84243 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
H3F3AP84243 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3F3AP84243 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3F3AP84243 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3F3AP84243 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3F3AP84243 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.65□□□□□ -0.38
H3F3AP84243 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.65□□□□□ -0.38
H3F3AP84243 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3F3AP84243 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3F3AP84243 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3F3AP84243 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
H3F3AP84243 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
H3F3AP84243 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
H3F3AP84243 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC12.65□□□□□ -0.38
H3F3AP84243 NAGK-204ENST00000443872 878 ntTSL 3 BASIC12.65□□□□□ -0.38
H3F3AP84243 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC12.65□□□□□ -0.38
H3F3AP84243 AC114947.1-202ENST00000514136 344 ntBASIC12.65□□□□□ -0.38
H3F3AP84243 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC12.65□□□□□ -0.38
H3F3AP84243 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC12.65□□□□□ -0.38
H3F3AP84243 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC12.65□□□□□ -0.38
H3F3AP84243 NEU3-202ENST00000526068 431 ntTSL 2 BASIC12.65□□□□□ -0.38
H3F3AP84243 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC12.65□□□□□ -0.38
H3F3AP84243 CMC2-204ENST00000562713 573 ntTSL 3 BASIC12.65□□□□□ -0.38
H3F3AP84243 CMC2-209ENST00000565108 399 ntTSL 2 BASIC12.65□□□□□ -0.38
H3F3AP84243 RN7SL574P-201ENST00000581512 297 ntBASIC12.65□□□□□ -0.38
H3F3AP84243 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3F3AP84243 AC020922.3-201ENST00000595064 547 ntBASIC12.65□□□□□ -0.38
H3F3AP84243 AF254983.2-201ENST00000612331 135 ntBASIC12.65□□□□□ -0.38
H3F3AP84243 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3F3AP84243 CR392039.2-201ENST00000623182 509 ntBASIC12.65□□□□□ -0.38
H3F3AP84243 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC12.65□□□□□ -0.38
H3F3AP84243 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC12.65□□□□□ -0.38
H3F3AP84243 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC12.65□□□□□ -0.38
H3F3AP84243 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC12.65□□□□□ -0.38
H3F3AP84243 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3F3AP84243 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3F3AP84243 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
H3F3AP84243 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
H3F3AP84243 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
H3F3AP84243 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3F3AP84243 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
H3F3AP84243 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC12.65□□□□□ -0.38
H3F3AP84243 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3F3AP84243 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
H3F3AP84243 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3F3AP84243 AC111170.3-201ENST00000624282 2464 ntBASIC12.65□□□□□ -0.38
H3F3AP84243 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
H3F3AP84243 AC068760.1-201ENST00000493579 1953 ntBASIC12.65□□□□□ -0.38
H3F3AP84243 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3F3AP84243 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3F3AP84243 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
H3F3AP84243 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.65□□□□□ -0.39
H3F3AP84243 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
H3F3AP84243 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.39
H3F3AP84243 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
H3F3AP84243 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.39
H3F3AP84243 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
H3F3AP84243 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
H3F3AP84243 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3F3AP84243 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3F3AP84243 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.64□□□□□ -0.39
H3F3AP84243 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3F3AP84243 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.64□□□□□ -0.39
H3F3AP84243 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
H3F3AP84243 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
H3F3AP84243 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3F3AP84243 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
H3F3AP84243 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3F3AP84243 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3F3AP84243 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.64□□□□□ -0.39
H3F3AP84243 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.64□□□□□ -0.39
H3F3AP84243 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC12.64□□□□□ -0.39
H3F3AP84243 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC12.64□□□□□ -0.39
H3F3AP84243 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3F3AP84243 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
H3F3AP84243 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC12.64□□□□□ -0.39
H3F3AP84243 AL133338.1-201ENST00000565695 1517 ntBASIC12.64□□□□□ -0.39
H3F3AP84243 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
H3F3AP84243 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3F3AP84243 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
H3F3AP84243 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3F3AP84243 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
H3F3AP84243 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3F3AP84243 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
H3F3AP84243 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3F3AP84243 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
H3F3AP84243 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3F3AP84243 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
H3F3AP84243 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms