Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC13.43□□□□□ -0.26
GABREP78334 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
GABREP78334 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
GABREP78334 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC13.43□□□□□ -0.26
GABREP78334 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC13.43□□□□□ -0.26
GABREP78334 MAX-218ENST00000557746 571 ntTSL 4 BASIC13.43□□□□□ -0.26
GABREP78334 SORD2P-201ENST00000558556 1069 ntBASIC13.43□□□□□ -0.26
GABREP78334 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GABREP78334 MIR4265-201ENST00000582152 99 ntBASIC13.43□□□□□ -0.26
GABREP78334 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.43□□□□□ -0.26
GABREP78334 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
GABREP78334 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
GABREP78334 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
GABREP78334 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GABREP78334 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GABREP78334 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC13.43□□□□□ -0.26
GABREP78334 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GABREP78334 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
GABREP78334 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.43□□□□□ -0.26
GABREP78334 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
GABREP78334 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GABREP78334 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.43□□□□□ -0.26
GABREP78334 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.43□□□□□ -0.26
GABREP78334 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GABREP78334 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC13.43□□□□□ -0.26
GABREP78334 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
GABREP78334 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GABREP78334 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.42□□□□□ -0.26
GABREP78334 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC13.42□□□□□ -0.26
GABREP78334 LINC00552-201ENST00000625151 2579 ntBASIC13.42□□□□□ -0.26
GABREP78334 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GABREP78334 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.42□□□□□ -0.26
GABREP78334 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
GABREP78334 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
GABREP78334 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
GABREP78334 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GABREP78334 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
GABREP78334 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
GABREP78334 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GABREP78334 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
GABREP78334 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
GABREP78334 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
GABREP78334 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GABREP78334 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
GABREP78334 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
GABREP78334 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC13.42□□□□□ -0.26
GABREP78334 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GABREP78334 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
GABREP78334 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC13.42□□□□□ -0.26
GABREP78334 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC13.42□□□□□ -0.26
GABREP78334 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
GABREP78334 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC13.42□□□□□ -0.26
GABREP78334 ASS1P2-201ENST00000439895 1223 ntBASIC13.42□□□□□ -0.26
GABREP78334 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC13.42□□□□□ -0.26
GABREP78334 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC13.42□□□□□ -0.26
GABREP78334 RN7SL288P-201ENST00000490496 291 ntBASIC13.42□□□□□ -0.26
GABREP78334 EEF1GP8-201ENST00000506566 1154 ntBASIC13.42□□□□□ -0.26
GABREP78334 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC13.42□□□□□ -0.26
GABREP78334 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC13.42□□□□□ -0.26
GABREP78334 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC13.42□□□□□ -0.26
GABREP78334 KRT18P37-201ENST00000520711 1282 ntBASIC13.42□□□□□ -0.26
GABREP78334 CMC2-204ENST00000562713 573 ntTSL 3 BASIC13.42□□□□□ -0.26
GABREP78334 CMC2-209ENST00000565108 399 ntTSL 2 BASIC13.42□□□□□ -0.26
GABREP78334 NT5C-204ENST00000578337 582 ntTSL 2 BASIC13.42□□□□□ -0.26
GABREP78334 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
GABREP78334 NAV1-210ENST00000593583 726 ntBASIC13.42□□□□□ -0.26
GABREP78334 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC13.42□□□□□ -0.26
GABREP78334 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
GABREP78334 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
GABREP78334 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
GABREP78334 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.42□□□□□ -0.26
GABREP78334 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
GABREP78334 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
GABREP78334 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GABREP78334 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.42□□□□□ -0.26
GABREP78334 CR383656.2-201ENST00000548656 2254 ntBASIC13.42□□□□□ -0.26
GABREP78334 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GABREP78334 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
GABREP78334 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.42□□□□□ -0.26
GABREP78334 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
GABREP78334 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC13.42□□□□□ -0.26
GABREP78334 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC13.42□□□□□ -0.26
GABREP78334 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
GABREP78334 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
GABREP78334 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
GABREP78334 AL009178.2-201ENST00000597278 2719 ntBASIC13.41□□□□□ -0.26
GABREP78334 LINC00115-201ENST00000473798 1317 ntBASIC13.41□□□□□ -0.26
GABREP78334 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
GABREP78334 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
GABREP78334 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
GABREP78334 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GABREP78334 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.41□□□□□ -0.26
GABREP78334 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GABREP78334 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GABREP78334 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.41□□□□□ -0.26
GABREP78334 INTS4P1-203ENST00000641008 3683 ntBASIC13.41□□□□□ -0.26
GABREP78334 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GABREP78334 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
GABREP78334 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GABREP78334 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms