Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC13.32□□□□□ -0.28
TRA2BP62995 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRA2BP62995 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
TRA2BP62995 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC13.32□□□□□ -0.28
TRA2BP62995 EMC4-209ENST00000559421 497 ntTSL 2 BASIC13.32□□□□□ -0.28
TRA2BP62995 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC13.32□□□□□ -0.28
TRA2BP62995 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC13.32□□□□□ -0.28
TRA2BP62995 HPN-206ENST00000597419 1212 ntTSL 5 BASIC13.32□□□□□ -0.28
TRA2BP62995 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC13.32□□□□□ -0.28
TRA2BP62995 TP53-221ENST00000615910 1149 ntTSL 5 BASIC13.32□□□□□ -0.28
TRA2BP62995 AL161773.1-201ENST00000624845 863 ntBASIC13.32□□□□□ -0.28
TRA2BP62995 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRA2BP62995 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRA2BP62995 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRA2BP62995 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
TRA2BP62995 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
TRA2BP62995 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRA2BP62995 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TRA2BP62995 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
TRA2BP62995 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRA2BP62995 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRA2BP62995 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC13.32□□□□□ -0.28
TRA2BP62995 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC13.32□□□□□ -0.28
TRA2BP62995 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
TRA2BP62995 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC13.32□□□□□ -0.28
TRA2BP62995 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRA2BP62995 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRA2BP62995 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRA2BP62995 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRA2BP62995 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRA2BP62995 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
TRA2BP62995 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRA2BP62995 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC13.32□□□□□ -0.28
TRA2BP62995 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRA2BP62995 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
TRA2BP62995 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRA2BP62995 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRA2BP62995 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
TRA2BP62995 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRA2BP62995 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC13.31□□□□□ -0.28
TRA2BP62995 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRA2BP62995 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.31□□□□□ -0.28
TRA2BP62995 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRA2BP62995 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.31□□□□□ -0.28
TRA2BP62995 MARK2P16-201ENST00000605714 1723 ntBASIC13.31□□□□□ -0.28
TRA2BP62995 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRA2BP62995 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRA2BP62995 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.31□□□□□ -0.28
TRA2BP62995 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
TRA2BP62995 AC067931.2-201ENST00000623655 2003 ntBASIC13.31□□□□□ -0.28
TRA2BP62995 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC13.31□□□□□ -0.28
TRA2BP62995 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC13.31□□□□□ -0.28
TRA2BP62995 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRA2BP62995 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRA2BP62995 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.31□□□□□ -0.28
TRA2BP62995 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC13.31□□□□□ -0.28
TRA2BP62995 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC13.31□□□□□ -0.28
TRA2BP62995 AL596276.2-201ENST00000447525 331 ntBASIC13.31□□□□□ -0.28
TRA2BP62995 BX284668.4-201ENST00000453917 508 ntBASIC13.31□□□□□ -0.28
TRA2BP62995 KRT8P13-201ENST00000463294 1010 ntBASIC13.31□□□□□ -0.28
TRA2BP62995 ARTN-209ENST00000479128 471 ntTSL 3 BASIC13.31□□□□□ -0.28
TRA2BP62995 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC13.31□□□□□ -0.28
TRA2BP62995 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC13.31□□□□□ -0.28
TRA2BP62995 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.31□□□□□ -0.28
TRA2BP62995 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
TRA2BP62995 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRA2BP62995 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRA2BP62995 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRA2BP62995 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRA2BP62995 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
TRA2BP62995 F2-205ENST00000530231 1849 ntTSL 5 BASIC13.31□□□□□ -0.28
TRA2BP62995 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRA2BP62995 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRA2BP62995 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRA2BP62995 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC13.31□□□□□ -0.28
TRA2BP62995 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
TRA2BP62995 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRA2BP62995 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRA2BP62995 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRA2BP62995 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRA2BP62995 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC13.31□□□□□ -0.28
TRA2BP62995 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRA2BP62995 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.31□□□□□ -0.28
TRA2BP62995 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRA2BP62995 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRA2BP62995 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC13.3□□□□□ -0.28
TRA2BP62995 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.3□□□□□ -0.28
TRA2BP62995 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.3□□□□□ -0.28
TRA2BP62995 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC13.3□□□□□ -0.28
TRA2BP62995 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC13.3□□□□□ -0.28
TRA2BP62995 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRA2BP62995 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
TRA2BP62995 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
TRA2BP62995 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRA2BP62995 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
TRA2BP62995 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRA2BP62995 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRA2BP62995 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
TRA2BP62995 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC13.3□□□□□ -0.28
TRA2BP62995 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms