Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
DEFA3P59666 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
DEFA3P59666 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC12.41□□□□□ -0.42
DEFA3P59666 KCTD10-201ENST00000228495 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
DEFA3P59666 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
DEFA3P59666 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
DEFA3P59666 ZSCAN32-203ENST00000396852 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
DEFA3P59666 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
DEFA3P59666 BOLL-201ENST00000282278 2742 ntTSL 2 BASIC12.4□□□□□ -0.42
DEFA3P59666 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC12.4□□□□□ -0.42
DEFA3P59666 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
DEFA3P59666 TPO-204ENST00000382198 2283 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
DEFA3P59666 TP53I11-203ENST00000395648 3381 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
DEFA3P59666 CDKN2B-201ENST00000276925 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
DEFA3P59666 PCDHA10-202ENST00000506939 3788 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
DEFA3P59666 RNF220-202ENST00000355387 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
DEFA3P59666 ATG16L1-202ENST00000373525 2767 ntTSL 5 BASIC12.4□□□□□ -0.42
DEFA3P59666 FAM105A-201ENST00000274217 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
DEFA3P59666 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
DEFA3P59666 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
DEFA3P59666 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
DEFA3P59666 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
DEFA3P59666 AL671277.1-201ENST00000429656 993 ntBASIC12.4□□□□□ -0.42
DEFA3P59666 RPL13P2-201ENST00000440687 659 ntBASIC12.4□□□□□ -0.42
DEFA3P59666 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC12.4□□□□□ -0.42
DEFA3P59666 RNPS1P1-201ENST00000507437 918 ntBASIC12.4□□□□□ -0.42
DEFA3P59666 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
DEFA3P59666 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
DEFA3P59666 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.4□□□□□ -0.42
DEFA3P59666 AC012640.2-201ENST00000561606 901 ntBASIC12.4□□□□□ -0.42
DEFA3P59666 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
DEFA3P59666 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
DEFA3P59666 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC12.4□□□□□ -0.42
DEFA3P59666 DBP-204ENST00000599385 709 ntTSL 3 BASIC12.4□□□□□ -0.42
DEFA3P59666 AC104506.1-201ENST00000609247 429 ntBASIC12.4□□□□□ -0.42
DEFA3P59666 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC12.4□□□□□ -0.42
DEFA3P59666 ETNK1-201ENST00000266517 7159 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
DEFA3P59666 FLNA-219ENST00000610817 7595 ntTSL 5 BASIC12.4□□□□□ -0.42
DEFA3P59666 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
DEFA3P59666 LINC00523-206ENST00000556697 2071 ntTSL 2 BASIC12.4□□□□□ -0.42
DEFA3P59666 PIGS-202ENST00000308360 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
DEFA3P59666 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC12.4□□□□□ -0.42
DEFA3P59666 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
DEFA3P59666 CTAGE10P-201ENST00000318353 2408 ntBASIC12.4□□□□□ -0.42
DEFA3P59666 PARN-203ENST00000437198 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
DEFA3P59666 RNF144B-201ENST00000259939 5036 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
DEFA3P59666 MME-204ENST00000462745 3590 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
DEFA3P59666 MICA-210ENST00000616296 2260 ntTSL 5 BASIC12.4□□□□□ -0.42
DEFA3P59666 ZNF667-201ENST00000292069 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
DEFA3P59666 STXBP1-221ENST00000637953 3925 ntTSL 5 BASIC12.4□□□□□ -0.43
DEFA3P59666 WIPF3-201ENST00000242140 4184 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.43
DEFA3P59666 BAHCC1-206ENST00000584436 10801 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.43
DEFA3P59666 RNF130-207ENST00000522208 9945 ntTSL 5 BASIC12.4□□□□□ -0.43
DEFA3P59666 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC12.4□□□□□ -0.43
DEFA3P59666 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
DEFA3P59666 AL391845.2-201ENST00000443930 1954 ntTSL 2 BASIC12.39□□□□□ -0.43
DEFA3P59666 SLC26A6-203ENST00000358747 2729 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
DEFA3P59666 FOXJ3-202ENST00000361776 5106 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
DEFA3P59666 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
DEFA3P59666 DBF4B-202ENST00000393547 1810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
DEFA3P59666 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
DEFA3P59666 CHIAP2-201ENST00000369743 2829 ntTSL 5 BASIC12.39□□□□□ -0.43
DEFA3P59666 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
DEFA3P59666 WDR27-203ENST00000448612 3178 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
DEFA3P59666 PLOD2-209ENST00000494950 2908 ntTSL 2 BASIC12.39□□□□□ -0.43
DEFA3P59666 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.39□□□□□ -0.43
DEFA3P59666 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
DEFA3P59666 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
DEFA3P59666 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
DEFA3P59666 HMGCS1-201ENST00000325110 3506 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
DEFA3P59666 CORO7-PAM16-202ENST00000572467 3284 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
DEFA3P59666 TRERF1-202ENST00000354325 4138 ntTSL 5 BASIC12.39□□□□□ -0.43
DEFA3P59666 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
DEFA3P59666 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
DEFA3P59666 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.39□□□□□ -0.43
DEFA3P59666 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
DEFA3P59666 TFAMP1-201ENST00000412727 736 ntBASIC12.39□□□□□ -0.43
DEFA3P59666 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12.39□□□□□ -0.43
DEFA3P59666 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
DEFA3P59666 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
DEFA3P59666 AL161932.2-201ENST00000435436 679 ntBASIC12.39□□□□□ -0.43
DEFA3P59666 RN7SL589P-201ENST00000481268 310 ntBASIC12.39□□□□□ -0.43
DEFA3P59666 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
DEFA3P59666 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC12.39□□□□□ -0.43
DEFA3P59666 RARRES2P9-201ENST00000565168 469 ntBASIC12.39□□□□□ -0.43
DEFA3P59666 DUX4L47-201ENST00000566374 394 ntBASIC12.39□□□□□ -0.43
DEFA3P59666 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC12.39□□□□□ -0.43
DEFA3P59666 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC12.39□□□□□ -0.43
DEFA3P59666 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
DEFA3P59666 AP001462.1-201ENST00000594089 452 ntBASIC12.39□□□□□ -0.43
DEFA3P59666 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
DEFA3P59666 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
DEFA3P59666 AC004877.2-201ENST00000623941 599 ntBASIC12.39□□□□□ -0.43
DEFA3P59666 SPCS2-209ENST00000610881 2711 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
DEFA3P59666 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
DEFA3P59666 CBR4-202ENST00000504480 1602 ntTSL 2 BASIC12.39□□□□□ -0.43
DEFA3P59666 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
DEFA3P59666 KCNH1-202ENST00000367007 3445 ntTSL 5 BASIC12.39□□□□□ -0.43
DEFA3P59666 TRAF3-201ENST00000347662 7700 ntTSL 5 BASIC12.39□□□□□ -0.43
DEFA3P59666 AL357060.2-202ENST00000606998 1959 ntTSL 2 BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms