Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.7□□□□□ -0.38
CLRN1P58418 AL928654.5-201ENST00000624831 2501 ntBASIC12.7□□□□□ -0.38
CLRN1P58418 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
CLRN1P58418 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLRN1P58418 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLRN1P58418 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLRN1P58418 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC12.7□□□□□ -0.38
CLRN1P58418 ARHGAP23P1-201ENST00000562773 1937 ntBASIC12.7□□□□□ -0.38
CLRN1P58418 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLRN1P58418 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC12.7□□□□□ -0.38
CLRN1P58418 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
CLRN1P58418 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.7□□□□□ -0.38
CLRN1P58418 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.7□□□□□ -0.38
CLRN1P58418 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLRN1P58418 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.7□□□□□ -0.38
CLRN1P58418 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CLRN1P58418 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC12.7□□□□□ -0.38
CLRN1P58418 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC12.7□□□□□ -0.38
CLRN1P58418 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLRN1P58418 AC103592.1-201ENST00000394513 664 ntBASIC12.7□□□□□ -0.38
CLRN1P58418 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC12.7□□□□□ -0.38
CLRN1P58418 AC078875.1-201ENST00000431907 724 ntBASIC12.7□□□□□ -0.38
CLRN1P58418 AK2P2-201ENST00000439142 405 ntBASIC12.7□□□□□ -0.38
CLRN1P58418 RPS2P32-201ENST00000439199 892 ntBASIC12.7□□□□□ -0.38
CLRN1P58418 AC104073.2-201ENST00000453737 312 ntBASIC12.7□□□□□ -0.38
CLRN1P58418 PFN1P12-201ENST00000455938 534 ntBASIC12.7□□□□□ -0.38
CLRN1P58418 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC12.7□□□□□ -0.38
CLRN1P58418 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC12.7□□□□□ -0.38
CLRN1P58418 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC12.7□□□□□ -0.38
CLRN1P58418 PUDP-206ENST00000540122 825 ntTSL 2 BASIC12.7□□□□□ -0.38
CLRN1P58418 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CLRN1P58418 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC12.7□□□□□ -0.38
CLRN1P58418 KRT18P8-201ENST00000581937 1246 ntBASIC12.7□□□□□ -0.38
CLRN1P58418 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CLRN1P58418 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC12.7□□□□□ -0.38
CLRN1P58418 AC068587.8-201ENST00000641239 219 ntBASIC12.7□□□□□ -0.38
CLRN1P58418 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLRN1P58418 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC12.7□□□□□ -0.38
CLRN1P58418 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CLRN1P58418 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
CLRN1P58418 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CLRN1P58418 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLRN1P58418 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CLRN1P58418 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
CLRN1P58418 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
CLRN1P58418 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CLRN1P58418 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLRN1P58418 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLRN1P58418 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLRN1P58418 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLRN1P58418 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC12.7□□□□□ -0.38
CLRN1P58418 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLRN1P58418 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLRN1P58418 AC104581.4-201ENST00000623126 3052 ntBASIC12.7□□□□□ -0.38
CLRN1P58418 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.7□□□□□ -0.38
CLRN1P58418 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12.7□□□□□ -0.38
CLRN1P58418 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
CLRN1P58418 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLRN1P58418 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLRN1P58418 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLRN1P58418 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLRN1P58418 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLRN1P58418 AL805961.2-201ENST00000642139 4817 ntBASIC12.69□□□□□ -0.38
CLRN1P58418 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC12.69□□□□□ -0.38
CLRN1P58418 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLRN1P58418 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.69□□□□□ -0.38
CLRN1P58418 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CLRN1P58418 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CLRN1P58418 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
CLRN1P58418 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
CLRN1P58418 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLRN1P58418 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
CLRN1P58418 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CLRN1P58418 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC12.69□□□□□ -0.38
CLRN1P58418 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLRN1P58418 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
CLRN1P58418 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
CLRN1P58418 FAM90A12P-201ENST00000519497 2375 ntBASIC12.69□□□□□ -0.38
CLRN1P58418 FAM90A24P-201ENST00000520792 2369 ntBASIC12.69□□□□□ -0.38
CLRN1P58418 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLRN1P58418 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLRN1P58418 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
CLRN1P58418 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CLRN1P58418 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CLRN1P58418 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLRN1P58418 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC12.69□□□□□ -0.38
CLRN1P58418 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLRN1P58418 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC12.69□□□□□ -0.38
CLRN1P58418 AC104306.2-201ENST00000451877 341 ntBASIC12.69□□□□□ -0.38
CLRN1P58418 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CLRN1P58418 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CLRN1P58418 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC12.69□□□□□ -0.38
CLRN1P58418 SERPINA13P-202ENST00000478994 924 ntBASIC12.69□□□□□ -0.38
CLRN1P58418 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC12.69□□□□□ -0.38
CLRN1P58418 AC126915.1-201ENST00000522847 1038 ntBASIC12.69□□□□□ -0.38
CLRN1P58418 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC12.69□□□□□ -0.38
CLRN1P58418 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC12.69□□□□□ -0.38
CLRN1P58418 MAX-218ENST00000557746 571 ntTSL 4 BASIC12.69□□□□□ -0.38
CLRN1P58418 AC013355.1-201ENST00000562625 723 ntBASIC12.69□□□□□ -0.38
CLRN1P58418 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms