Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BRPF1P55201 AC078991.1-201ENST00000437297 610 ntBASIC17.95■□□□□ 0.46
BRPF1P55201 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC17.95■□□□□ 0.46
BRPF1P55201 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
BRPF1P55201 CD81-209ENST00000492627 886 ntTSL 3 BASIC17.95■□□□□ 0.46
BRPF1P55201 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
BRPF1P55201 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
BRPF1P55201 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
BRPF1P55201 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC17.95■□□□□ 0.46
BRPF1P55201 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
BRPF1P55201 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
BRPF1P55201 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC17.95■□□□□ 0.46
BRPF1P55201 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BRPF1P55201 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC17.95■□□□□ 0.46
BRPF1P55201 GMFG-209ENST00000600322 622 ntTSL 5 BASIC17.95■□□□□ 0.46
BRPF1P55201 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC17.95■□□□□ 0.46
BRPF1P55201 AC148477.9-201ENST00000623974 539 ntBASIC17.95■□□□□ 0.46
BRPF1P55201 CDK7-214ENST00000626796 358 ntTSL 5 BASIC17.95■□□□□ 0.46
BRPF1P55201 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC17.95■□□□□ 0.46
BRPF1P55201 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
BRPF1P55201 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
BRPF1P55201 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
BRPF1P55201 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BRPF1P55201 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC17.95■□□□□ 0.46
BRPF1P55201 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BRPF1P55201 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BRPF1P55201 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BRPF1P55201 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
BRPF1P55201 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
BRPF1P55201 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BRPF1P55201 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BRPF1P55201 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BRPF1P55201 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
BRPF1P55201 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC17.95■□□□□ 0.46
BRPF1P55201 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BRPF1P55201 KRT18P9-201ENST00000604826 1300 ntBASIC17.95■□□□□ 0.46
BRPF1P55201 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
BRPF1P55201 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
BRPF1P55201 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
BRPF1P55201 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BRPF1P55201 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
BRPF1P55201 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
BRPF1P55201 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
BRPF1P55201 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
BRPF1P55201 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BRPF1P55201 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC17.94■□□□□ 0.46
BRPF1P55201 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BRPF1P55201 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC17.94■□□□□ 0.46
BRPF1P55201 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC17.94■□□□□ 0.46
BRPF1P55201 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC17.94■□□□□ 0.46
BRPF1P55201 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
BRPF1P55201 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC17.94■□□□□ 0.46
BRPF1P55201 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BRPF1P55201 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
BRPF1P55201 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
BRPF1P55201 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
BRPF1P55201 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
BRPF1P55201 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC17.94■□□□□ 0.46
BRPF1P55201 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC17.94■□□□□ 0.46
BRPF1P55201 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
BRPF1P55201 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
BRPF1P55201 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC17.94■□□□□ 0.46
BRPF1P55201 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC17.94■□□□□ 0.46
BRPF1P55201 RN7SL665P-201ENST00000578793 300 ntBASIC17.94■□□□□ 0.46
BRPF1P55201 MIR3677-201ENST00000578964 60 ntBASIC17.94■□□□□ 0.46
BRPF1P55201 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC17.94■□□□□ 0.46
BRPF1P55201 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC17.94■□□□□ 0.46
BRPF1P55201 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC17.94■□□□□ 0.46
BRPF1P55201 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
BRPF1P55201 CMC2-224ENST00000630396 481 ntTSL 5 BASIC17.94■□□□□ 0.46
BRPF1P55201 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC17.94■□□□□ 0.46
BRPF1P55201 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC17.94■□□□□ 0.46
BRPF1P55201 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BRPF1P55201 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
BRPF1P55201 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
BRPF1P55201 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
BRPF1P55201 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
BRPF1P55201 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
BRPF1P55201 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC17.94■□□□□ 0.46
BRPF1P55201 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BRPF1P55201 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BRPF1P55201 AC020917.4-201ENST00000623994 1999 ntBASIC17.93■□□□□ 0.46
BRPF1P55201 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BRPF1P55201 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BRPF1P55201 FAM90A2P-201ENST00000511144 1395 ntBASIC17.93■□□□□ 0.46
BRPF1P55201 FAM90A25P-201ENST00000528404 1395 ntBASIC17.93■□□□□ 0.46
BRPF1P55201 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC17.93■□□□□ 0.46
BRPF1P55201 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
BRPF1P55201 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
BRPF1P55201 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
BRPF1P55201 MARK2P16-201ENST00000605714 1723 ntBASIC17.93■□□□□ 0.46
BRPF1P55201 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BRPF1P55201 KRT8P18-201ENST00000413425 1445 ntBASIC17.93■□□□□ 0.46
BRPF1P55201 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BRPF1P55201 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
BRPF1P55201 OR2K2-202ENST00000374428 1038 ntBASIC17.93■□□□□ 0.46
BRPF1P55201 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
BRPF1P55201 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
BRPF1P55201 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
BRPF1P55201 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms