Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC1A1P43005 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC14.82□□□□□ -0.04
SLC1A1P43005 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC1A1P43005 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SLC1A1P43005 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.82□□□□□ -0.04
SLC1A1P43005 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
SLC1A1P43005 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC1A1P43005 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SLC1A1P43005 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC1A1P43005 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
SLC1A1P43005 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.82□□□□□ -0.04
SLC1A1P43005 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SLC1A1P43005 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC1A1P43005 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC1A1P43005 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SLC1A1P43005 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
SLC1A1P43005 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.82□□□□□ -0.04
SLC1A1P43005 FAM21FP-201ENST00000426241 1131 ntBASIC14.82□□□□□ -0.04
SLC1A1P43005 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.82□□□□□ -0.04
SLC1A1P43005 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.82□□□□□ -0.04
SLC1A1P43005 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.82□□□□□ -0.04
SLC1A1P43005 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC14.82□□□□□ -0.04
SLC1A1P43005 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SLC1A1P43005 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SLC1A1P43005 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.82□□□□□ -0.04
SLC1A1P43005 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
SLC1A1P43005 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC14.82□□□□□ -0.04
SLC1A1P43005 RNA5SP412-201ENST00000516234 123 ntBASIC14.82□□□□□ -0.04
SLC1A1P43005 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC1A1P43005 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.82□□□□□ -0.04
SLC1A1P43005 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.82□□□□□ -0.04
SLC1A1P43005 MIR497HG-202ENST00000572453 3838 ntBASIC14.82□□□□□ -0.04
SLC1A1P43005 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.82□□□□□ -0.04
SLC1A1P43005 AC133552.6-201ENST00000613406 534 ntBASIC14.82□□□□□ -0.04
SLC1A1P43005 AL136295.7-201ENST00000619226 1200 ntBASIC14.82□□□□□ -0.04
SLC1A1P43005 AC022748.3-201ENST00000621828 275 ntBASIC14.82□□□□□ -0.04
SLC1A1P43005 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.82□□□□□ -0.04
SLC1A1P43005 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC1A1P43005 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SLC1A1P43005 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC14.82□□□□□ -0.04
SLC1A1P43005 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SLC1A1P43005 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC14.82□□□□□ -0.04
SLC1A1P43005 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC1A1P43005 CR383656.2-201ENST00000548656 2254 ntBASIC14.82□□□□□ -0.04
SLC1A1P43005 AL445250.1-201ENST00000641671 2259 ntBASIC14.82□□□□□ -0.04
SLC1A1P43005 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC1A1P43005 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SLC1A1P43005 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC1A1P43005 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SLC1A1P43005 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC1A1P43005 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC1A1P43005 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.82□□□□□ -0.04
SLC1A1P43005 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC1A1P43005 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SLC1A1P43005 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC1A1P43005 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC1A1P43005 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC1A1P43005 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SLC1A1P43005 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC1A1P43005 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC1A1P43005 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SLC1A1P43005 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SLC1A1P43005 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC1A1P43005 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC1A1P43005 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SLC1A1P43005 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SLC1A1P43005 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC1A1P43005 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SLC1A1P43005 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC14.81□□□□□ -0.04
SLC1A1P43005 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC1A1P43005 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC1A1P43005 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC1A1P43005 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC1A1P43005 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC1A1P43005 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SLC1A1P43005 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.81□□□□□ -0.04
SLC1A1P43005 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC1A1P43005 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
SLC1A1P43005 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SLC1A1P43005 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.81□□□□□ -0.04
SLC1A1P43005 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.81□□□□□ -0.04
SLC1A1P43005 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.81□□□□□ -0.04
SLC1A1P43005 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
SLC1A1P43005 RN7SL163P-201ENST00000583100 276 ntBASIC14.81□□□□□ -0.04
SLC1A1P43005 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.81□□□□□ -0.04
SLC1A1P43005 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC1A1P43005 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC1A1P43005 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SLC1A1P43005 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
SLC1A1P43005 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SLC1A1P43005 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
SLC1A1P43005 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC1A1P43005 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SLC1A1P43005 AC004623.1-201ENST00000624592 2127 ntBASIC14.81□□□□□ -0.04
SLC1A1P43005 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.81□□□□□ -0.04
SLC1A1P43005 MEX3B-202ENST00000558133 4333 ntBASIC14.81□□□□□ -0.04
SLC1A1P43005 AC024075.2-201ENST00000598112 1473 ntBASIC14.81□□□□□ -0.04
SLC1A1P43005 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SLC1A1P43005 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SLC1A1P43005 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms