Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
FDFT1P37268 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
FDFT1P37268 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
FDFT1P37268 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
FDFT1P37268 AL139158.3-201ENST00000641212 1562 ntBASIC14.47□□□□□ -0.09
FDFT1P37268 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC14.47□□□□□ -0.09
FDFT1P37268 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
FDFT1P37268 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC14.47□□□□□ -0.09
FDFT1P37268 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
FDFT1P37268 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
FDFT1P37268 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
FDFT1P37268 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
FDFT1P37268 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
FDFT1P37268 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
FDFT1P37268 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
FDFT1P37268 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FDFT1P37268 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FDFT1P37268 AC083964.2-201ENST00000623988 2396 ntBASIC14.46□□□□□ -0.09
FDFT1P37268 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC14.46□□□□□ -0.09
FDFT1P37268 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC14.46□□□□□ -0.09
FDFT1P37268 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
FDFT1P37268 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
FDFT1P37268 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC14.46□□□□□ -0.09
FDFT1P37268 AC025183.3-201ENST00000623526 1482 ntBASIC14.46□□□□□ -0.09
FDFT1P37268 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
FDFT1P37268 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
FDFT1P37268 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FDFT1P37268 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FDFT1P37268 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
FDFT1P37268 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
FDFT1P37268 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
FDFT1P37268 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FDFT1P37268 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FDFT1P37268 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC14.46□□□□□ -0.09
FDFT1P37268 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FDFT1P37268 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.46□□□□□ -0.09
FDFT1P37268 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.46□□□□□ -0.09
FDFT1P37268 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.46□□□□□ -0.09
FDFT1P37268 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.46□□□□□ -0.09
FDFT1P37268 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.46□□□□□ -0.09
FDFT1P37268 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.46□□□□□ -0.09
FDFT1P37268 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.46□□□□□ -0.09
FDFT1P37268 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
FDFT1P37268 JPT2-214ENST00000569765 782 ntTSL 2 BASIC14.46□□□□□ -0.09
FDFT1P37268 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.46□□□□□ -0.09
FDFT1P37268 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.46□□□□□ -0.09
FDFT1P37268 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.09
FDFT1P37268 AL096828.3-201ENST00000615354 462 ntBASIC14.46□□□□□ -0.09
FDFT1P37268 AL136295.7-201ENST00000619226 1200 ntBASIC14.46□□□□□ -0.09
FDFT1P37268 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FDFT1P37268 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
FDFT1P37268 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FDFT1P37268 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
FDFT1P37268 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
FDFT1P37268 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
FDFT1P37268 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
FDFT1P37268 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
FDFT1P37268 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
FDFT1P37268 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
FDFT1P37268 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC14.46□□□□□ -0.1
FDFT1P37268 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
FDFT1P37268 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
FDFT1P37268 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC14.46□□□□□ -0.1
FDFT1P37268 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
FDFT1P37268 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC14.45□□□□□ -0.1
FDFT1P37268 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
FDFT1P37268 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
FDFT1P37268 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
FDFT1P37268 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
FDFT1P37268 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
FDFT1P37268 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
FDFT1P37268 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
FDFT1P37268 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
FDFT1P37268 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
FDFT1P37268 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.45□□□□□ -0.1
FDFT1P37268 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC14.45□□□□□ -0.1
FDFT1P37268 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
FDFT1P37268 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
FDFT1P37268 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
FDFT1P37268 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
FDFT1P37268 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
FDFT1P37268 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.45□□□□□ -0.1
FDFT1P37268 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
FDFT1P37268 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC14.45□□□□□ -0.1
FDFT1P37268 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.45□□□□□ -0.1
FDFT1P37268 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
FDFT1P37268 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC14.45□□□□□ -0.1
FDFT1P37268 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.45□□□□□ -0.1
FDFT1P37268 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC14.45□□□□□ -0.1
FDFT1P37268 RN7SL163P-201ENST00000583100 276 ntBASIC14.45□□□□□ -0.1
FDFT1P37268 AC017083.2-201ENST00000608069 979 ntBASIC14.45□□□□□ -0.1
FDFT1P37268 MIR6805-201ENST00000615055 62 ntBASIC14.45□□□□□ -0.1
FDFT1P37268 AC022748.3-201ENST00000621828 275 ntBASIC14.45□□□□□ -0.1
FDFT1P37268 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.45□□□□□ -0.1
FDFT1P37268 AC004923.1-202ENST00000642106 209 ntBASIC14.45□□□□□ -0.1
FDFT1P37268 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
FDFT1P37268 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
FDFT1P37268 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
FDFT1P37268 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
FDFT1P37268 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms