Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LTBRP36941 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
LTBRP36941 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LTBRP36941 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
LTBRP36941 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LTBRP36941 DLX4-206ENST00000611342 1662 ntBASIC14.21□□□□□ -0.13
LTBRP36941 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC14.21□□□□□ -0.13
LTBRP36941 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
LTBRP36941 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LTBRP36941 NAT8B-201ENST00000377712 765 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
LTBRP36941 RBMXP1-201ENST00000408004 1191 ntBASIC14.21□□□□□ -0.13
LTBRP36941 KCNMA1-AS1-201ENST00000426234 863 ntTSL 5 BASIC14.21□□□□□ -0.13
LTBRP36941 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
LTBRP36941 AL357033.2-201ENST00000430184 739 ntTSL 3 BASIC14.21□□□□□ -0.13
LTBRP36941 AC108879.1-201ENST00000438026 828 ntTSL 3 BASIC14.21□□□□□ -0.13
LTBRP36941 HNRNPA1P3-201ENST00000440968 551 ntBASIC14.21□□□□□ -0.13
LTBRP36941 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC14.21□□□□□ -0.13
LTBRP36941 SRP9P1-201ENST00000445874 261 ntBASIC14.21□□□□□ -0.13
LTBRP36941 RN7SL2-201ENST00000490232 300 ntBASIC14.21□□□□□ -0.13
LTBRP36941 AL662899.2-201ENST00000503322 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LTBRP36941 AC139493.2-202ENST00000510155 544 ntTSL 3 BASIC14.21□□□□□ -0.13
LTBRP36941 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC14.21□□□□□ -0.13
LTBRP36941 METTL7AP1-201ENST00000547343 496 ntBASIC14.21□□□□□ -0.13
LTBRP36941 AC078923.1-201ENST00000552856 748 ntTSL 3 BASIC14.21□□□□□ -0.13
LTBRP36941 PEX11A-204ENST00000561224 529 ntTSL 4 BASIC14.21□□□□□ -0.13
LTBRP36941 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC14.21□□□□□ -0.13
LTBRP36941 MIR4640-201ENST00000581824 90 ntBASIC14.21□□□□□ -0.13
LTBRP36941 RN7SL4P-201ENST00000584058 295 ntBASIC14.21□□□□□ -0.13
LTBRP36941 AC008993.3-201ENST00000633603 631 ntTSL 5 BASIC14.21□□□□□ -0.13
LTBRP36941 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LTBRP36941 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC14.21□□□□□ -0.13
LTBRP36941 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LTBRP36941 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
LTBRP36941 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.21□□□□□ -0.13
LTBRP36941 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LTBRP36941 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LTBRP36941 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
LTBRP36941 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
LTBRP36941 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
LTBRP36941 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LTBRP36941 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
LTBRP36941 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LTBRP36941 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LTBRP36941 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC14.2□□□□□ -0.14
LTBRP36941 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC14.2□□□□□ -0.14
LTBRP36941 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.2□□□□□ -0.14
LTBRP36941 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LTBRP36941 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LTBRP36941 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LTBRP36941 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LTBRP36941 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LTBRP36941 SMUG1-220ENST00000513838 2119 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LTBRP36941 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
LTBRP36941 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LTBRP36941 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LTBRP36941 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
LTBRP36941 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LTBRP36941 OR2T27-201ENST00000344889 954 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
LTBRP36941 MIR1226-201ENST00000408658 75 ntBASIC14.2□□□□□ -0.14
LTBRP36941 AL590399.1-204ENST00000430302 781 ntTSL 5 BASIC14.2□□□□□ -0.14
LTBRP36941 LINC01823-204ENST00000438722 794 ntTSL 3 BASIC14.2□□□□□ -0.14
LTBRP36941 Z69733.1-201ENST00000445990 632 ntTSL 3 BASIC14.2□□□□□ -0.14
LTBRP36941 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC14.2□□□□□ -0.14
LTBRP36941 YBX1P3-201ENST00000468366 909 ntBASIC14.2□□□□□ -0.14
LTBRP36941 RN7SL47P-201ENST00000488710 299 ntBASIC14.2□□□□□ -0.14
LTBRP36941 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LTBRP36941 NMNAT3-212ENST00000511444 873 ntTSL 3 BASIC14.2□□□□□ -0.14
LTBRP36941 THEG-204ENST00000530711 1162 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
LTBRP36941 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC14.2□□□□□ -0.14
LTBRP36941 AL136040.1-201ENST00000557775 601 ntTSL 3 BASIC14.2□□□□□ -0.14
LTBRP36941 AC007223.1-201ENST00000564076 572 ntTSL 3 BASIC14.2□□□□□ -0.14
LTBRP36941 Metazoa_SRP.147-201ENST00000576563 312 ntBASIC14.2□□□□□ -0.14
LTBRP36941 TMEM230-211ENST00000615008 594 ntTSL 4 BASIC14.2□□□□□ -0.14
LTBRP36941 CHD2-218ENST00000629346 1249 ntTSL 5 BASIC14.2□□□□□ -0.14
LTBRP36941 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LTBRP36941 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LTBRP36941 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
LTBRP36941 FAM133B-204ENST00000445716 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LTBRP36941 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LTBRP36941 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.2□□□□□ -0.14
LTBRP36941 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.2□□□□□ -0.14
LTBRP36941 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LTBRP36941 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LTBRP36941 AC012158.1-201ENST00000535684 1366 ntTSL 2 BASIC14.2□□□□□ -0.14
LTBRP36941 AC093462.1-201ENST00000621167 1683 ntBASIC14.2□□□□□ -0.14
LTBRP36941 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LTBRP36941 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LTBRP36941 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LTBRP36941 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
LTBRP36941 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LTBRP36941 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LTBRP36941 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
LTBRP36941 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LTBRP36941 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
LTBRP36941 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LTBRP36941 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LTBRP36941 RCC2P1-201ENST00000452257 1476 ntBASIC14.19□□□□□ -0.14
LTBRP36941 ANAPC15-203ENST00000502597 1481 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LTBRP36941 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
LTBRP36941 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms