Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
KRT2P35908 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC16.2■□□□□ 0.18
KRT2P35908 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT2P35908 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
KRT2P35908 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT2P35908 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
KRT2P35908 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC16.2■□□□□ 0.18
KRT2P35908 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT2P35908 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
KRT2P35908 BX679664.3-201ENST00000414070 555 ntBASIC16.2■□□□□ 0.18
KRT2P35908 PFN2-206ENST00000461930 606 ntTSL 4 BASIC16.2■□□□□ 0.18
KRT2P35908 RN7SL11P-201ENST00000471305 293 ntBASIC16.2■□□□□ 0.18
KRT2P35908 AC113935.1-201ENST00000471722 555 ntBASIC16.2■□□□□ 0.18
KRT2P35908 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC16.2■□□□□ 0.18
KRT2P35908 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC16.2■□□□□ 0.18
KRT2P35908 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
KRT2P35908 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.2■□□□□ 0.18
KRT2P35908 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC16.2■□□□□ 0.18
KRT2P35908 HPN-206ENST00000597419 1212 ntTSL 5 BASIC16.2■□□□□ 0.18
KRT2P35908 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC16.2■□□□□ 0.18
KRT2P35908 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT2P35908 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT2P35908 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC16.2■□□□□ 0.18
KRT2P35908 AC008620.2-201ENST00000510294 1569 ntBASIC16.2■□□□□ 0.18
KRT2P35908 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KRT2P35908 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KRT2P35908 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC16.2■□□□□ 0.18
KRT2P35908 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KRT2P35908 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT2P35908 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT2P35908 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT2P35908 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
KRT2P35908 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT2P35908 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT2P35908 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT2P35908 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC16.19■□□□□ 0.18
KRT2P35908 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC16.19■□□□□ 0.18
KRT2P35908 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC16.19■□□□□ 0.18
KRT2P35908 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC16.19■□□□□ 0.18
KRT2P35908 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT2P35908 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
KRT2P35908 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC16.19■□□□□ 0.18
KRT2P35908 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT2P35908 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT2P35908 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC16.19■□□□□ 0.18
KRT2P35908 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC16.19■□□□□ 0.18
KRT2P35908 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
KRT2P35908 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT2P35908 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
KRT2P35908 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
KRT2P35908 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT2P35908 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT2P35908 SALL4P6-201ENST00000429385 1691 ntBASIC16.19■□□□□ 0.18
KRT2P35908 MIR769-201ENST00000390225 118 ntBASIC16.19■□□□□ 0.18
KRT2P35908 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT2P35908 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC16.19■□□□□ 0.18
KRT2P35908 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC16.19■□□□□ 0.18
KRT2P35908 POU5F1P2-201ENST00000521750 823 ntBASIC16.19■□□□□ 0.18
KRT2P35908 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.19■□□□□ 0.18
KRT2P35908 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC16.19■□□□□ 0.18
KRT2P35908 MIR6769A-201ENST00000617340 73 ntBASIC16.19■□□□□ 0.18
KRT2P35908 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC16.19■□□□□ 0.18
KRT2P35908 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC16.19■□□□□ 0.18
KRT2P35908 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
KRT2P35908 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
KRT2P35908 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT2P35908 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KRT2P35908 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT2P35908 FMO6P-201ENST00000236166 1620 ntBASIC16.19■□□□□ 0.18
KRT2P35908 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT2P35908 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC16.19■□□□□ 0.18
KRT2P35908 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT2P35908 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC16.19■□□□□ 0.18
KRT2P35908 AC092053.3-201ENST00000641308 4975 ntBASIC16.18■□□□□ 0.18
KRT2P35908 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT2P35908 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT2P35908 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
KRT2P35908 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC16.18■□□□□ 0.18
KRT2P35908 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC16.18■□□□□ 0.18
KRT2P35908 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT2P35908 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC16.18■□□□□ 0.18
KRT2P35908 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC16.18■□□□□ 0.18
KRT2P35908 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC16.18■□□□□ 0.18
KRT2P35908 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KRT2P35908 AC008132.1-202ENST00000342005 1389 ntBASIC16.18■□□□□ 0.18
KRT2P35908 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KRT2P35908 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC16.18■□□□□ 0.18
KRT2P35908 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KRT2P35908 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT2P35908 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC16.18■□□□□ 0.18
KRT2P35908 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT2P35908 ELK2AP-201ENST00000392510 1007 ntBASIC16.18■□□□□ 0.18
KRT2P35908 BANF1P3-201ENST00000412556 261 ntBASIC16.18■□□□□ 0.18
KRT2P35908 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC16.18■□□□□ 0.18
KRT2P35908 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC16.18■□□□□ 0.18
KRT2P35908 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC16.18■□□□□ 0.18
KRT2P35908 AC073150.1-201ENST00000450406 1084 ntBASIC16.18■□□□□ 0.18
KRT2P35908 REEP1-202ENST00000453231 940 ntTSL 2 BASIC16.18■□□□□ 0.18
KRT2P35908 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KRT2P35908 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms